CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG01352
(
Caenorhabditis briggsae
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBG01352
T301435_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.768
0.514
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.768
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG01352
Nuclear receptor
25
94
KDCEVCGLPAHGKHYGAISCRACAAFFRRYGTSGHVKPCKTGGNCVVRKKGWFNCKKCRLEKCKNVGMKI
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis briggsae
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSAMEG00000010579
Ailuropoda melanoleuca
ENSAMEG00000010579
N
ZNF683
Callithrix jacchus
ENSCJAG00000009793
N
ZNF683
Canis familiaris
ENSCAFG00000012496
N
ZNF683
Echinops telfairi
ENSETEG00000004329
N
ENSSTOG00000016074
Ictidomys tridecemlineatus
ENSSTOG00000016074
N
Zfp683
Mus musculus
ENSMUSG00000049410
N
ZNF683
Oryctolagus cuniculus
ENSOCUG00000016978
N
ZNF683
Tupaia belangeri
ENSTBEG00000011435
N