CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBN18082
(
Caenorhabditis brenneri
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CBN18082
T301789_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-182
M00701_2.00
Caenorhabditis elegans
DWBYGTGWCH
DGWCACRVWH
PBM
Narasimhan et al.(2015)
pTH10779
0.755
0.514
nhr-182
M00702_2.00
Caenorhabditis elegans
NNNHRTRNHN
NDNYAYDNNN
PBM
Narasimhan et al.(2015)
pTH6106
0.755
0.514
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBN18082
Nuclear receptor
28
99
KSCQVCGQKAHGSHFGAVTCRACAAFFRRVAAGANFVIKCQKGGGKCEIISNGRSCCKKCRLKKCKDVGMDI
Links
Other
Nuclear receptor
family TFs
Other
Caenorhabditis brenneri
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_078350
Acremonium chrysogenum
ACRE_078350
N
0.000
e_gw1.00771.84.1
Aspergillus carbonarius
e_gw1.00771.84.1
N
0.000
AFUA_5G01550
Aspergillus fumigatus
CADAFUAG00002870
N
0.000
CADANGAG00005441
Aspergillus niger
CADANGAG00005441
N
0.000
PVAR5_0122
Byssochlamys spectabilis
PVAR5_0122
N
0.000
PV04_00699
Capronia semiimmersa
PV04_00699
N
0.000
CHGG_05398
Chaetomium globosum
CHGG_05398
N
0.000
Z519_11260
Cladophialophora bantiana
Z519_11260
N
0.000
G647_01336
Cladophialophora carrionii
G647_01336
N
0.000
PV07_02862
Cladophialophora immunda
PV07_02862
N
0.000
A1O5_13134
Cladophialophora psammophila
A1O5_13134
N
0.000
A1O7_01274
Cladophialophora yegresii
A1O7_01274
N
0.000
H072_10163
Dactylellina haptotyla
H072_10163
N
0.000
PV06_10606
Exophiala oligosperma
PV06_10606
N
0.000
PV11_06549
Exophiala sideris
PV11_06549
N
0.000
PV08_02174
Exophiala spinifera
PV08_02174
N
0.000
PV05_00069
Exophiala xenobiotica
PV05_00069
N
0.000
Z517_00469
Fonsecaea pedrosoi
Z517_00469
N
0.000
FFUJ_00276
Fusarium fujikuroi
FFUJ_00276
N
0.000
FGRRES_00217
Fusarium graminearum
FGRRES_00217
N
0.000
FOXG_01257
Fusarium oxysporum
FOXG_01257
N
0.000
FPSE_06963
Fusarium pseudograminearum
FPSE_06963
N
0.000
NechaG80838
Fusarium solani
NechaG80838
N
0.000
fgenesh1_pg.sca_5_chr5_3_0000637
Nectria haematococca
fgenesh1_pg.sca_5_chr5_3_0000637
N
0.000
OIDMADRAFT_169765
Oidiodendron maius
OIDMADRAFT_169765
N
0.000
Pc16g10860
Penicillium chrysogenum
Pc16g10860
N
0.000
PEX1_030190
Penicillium expansum
PEX1_030190
N
0.000
PITC_081790
Penicillium italicum
PITC_081790
N
0.000
PMAA_080390
Penicillium marneffei
PMAA_080390
N
0.000
PCH_Pc16g10860
Penicillium rubens
PCH_Pc16g10860
N
0.000
U727_00431181161
Penicillium solitum
U727_00431181161
N
0.000
Z518_11281
Rhinocladiella mackenziei
Z518_11281
N
0.000
SBOR_4155
Sclerotinia borealis
SBOR_4155
N
0.000
S40288_01000
Stachybotrys chartarum
S40288_01000
N
0.000
S40285_04047
Stachybotrys chlorohalonata
S40285_04047
N
0.000
SNOG_10852
Stagonospora nodorum
SNOG_10852
N
0.000
PMAA_080390
Talaromyces marneffei
PMAA_080390
N
0.000
TSTA_114940
Talaromyces stipitatus
TSTA_114940
N
0.000