CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSOARG00000014525
(
Ovis aries
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
ENSOARG00000014525
T304051_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Ar
M00821_2.00
Mus musculus
NRRGAACAYN
NRTGTTCYYN
PBM
Weirauch et al.(2013)
pTH1739
0.992
1.000
AR
M03389_2.00
Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH
SELEX
Jolma et al.(2013)
AR_1
0.992
1.000
AR
M03390_2.00
Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH
SELEX
Jolma et al.(2013)
AR_2
0.992
1.000
Ar
M03436_2.00
Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN
SELEX
Jolma et al.(2013)
Ar_1
0.992
1.000
AR
M09288_2.00
Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH
Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A
0.992
1.000
Ar
M09331_2.00
Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN
Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A
0.992
1.000
AR
M09610_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824
0.992
1.000
AR
M09609_2.00
Homo sapiens
SHDRGVACAS
STGTBCYHDS
Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824
0.992
1.000
AR
M11157_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_01
0.992
1.000
AR
M11158_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_02
0.992
1.000
AR
M11159_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_03
0.992
1.000
AR
M11160_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_04
0.992
1.000
AR
M11161_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_11
0.992
1.000
AR
M11162_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_13
0.992
1.000
AR
M11163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_14_H
0.992
1.000
AR
M11164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q2
0.992
1.000
AR
M11165_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6_01
0.992
1.000
AR
M11166_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$AR_Q6
0.992
1.000
NR3C1
M03366_2.00
Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN
SELEX
Jolma et al.(2013)
NR3C1_1
0.978
0.786
NR3C1
M05587_2.00
Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX
0.978
0.786
NR3C1
M07986_2.00
Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH
ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha
0.978
0.786
NR3C1
M07987_2.00
Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha
0.978
0.786
NR3C1
M09270_2.00
Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH
Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A
0.978
0.786
NR3C1
M09607_2.00
Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN
Misc
Heinz et al.(2010)
A549-GR_GSE32465
0.978
0.786
NR3C1
M11119_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_01
0.978
0.786
NR3C1
M11120_2.00
Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM
Transfac
Matys et al.(2006)
V$GRE_C
0.978
0.786
NR3C1
M11121_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q4
0.978
0.786
NR3C1
M11122_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_01
0.978
0.786
NR3C1
M11123_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GR_Q6_02
0.978
0.786
NR3C1
M11124_2.00
Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN
Transfac
Matys et al.(2006)
V$GR_Q6
0.978
0.786
NR3C1
M11125_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NR3C1_04
0.978
0.786
NR3C1
M05588_2.00
Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY
SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX
0.978
0.786
PGR
M03923_2.00
Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH
SELEX
Nitta et al.(2015)
PGR_1
0.977
0.800
PGR
M09266_2.00
Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A
0.977
0.800
Pgr
M09326_2.00
Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY
Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A
0.977
0.800
PGR
M09603_2.00
Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY
Misc
Heinz et al.(2010)
T47D-PR_GSE31130
0.977
0.800
PGR
M11095_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_01
0.977
0.800
PGR
M11096_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_02
0.977
0.800
PGR
M11097_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PR_Q6
0.977
0.800
NR3C2
M02395_2.00
Homo sapiens
NNRGDACAN
NTGTHCYNN
PBM
Weirauch et al.(2014)
pTH5924
0.974
0.771
NR3C2
M03382_2.00
Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN
SELEX
Jolma et al.(2013)
NR3C2_1
0.974
0.771
NR3C2
M05637_2.00
Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX
0.974
0.771
NR3C2
M05638_2.00
Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN
SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX
0.974
0.771
Nr3c1
M05886_2.00
Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH
SMiLE-seq
Isakova et al.(2017)
GR
0.974
0.771
Nr3c1
M09318_2.00
Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY
Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A
0.974
0.771
Nr3c1
M09614_2.00
Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN
Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished
0.974
0.771
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOARP00000015583
Nuclear receptor
518
587
KTCLICGDEASGCHYGALTCGSCKVFFKRAAEGKQKYLCASRNDCTIDKFRRKNCPSCRLRKCYEAGMTL
Links
Other
Nuclear receptor
family TFs
Other
Ovis aries
TFs
271 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_019_00196
Aquilegia coerulea
Aquca_019_00196
N
FIT1
Arabidopsis lyrata
fgenesh2_kg.4__753__AT2G28160.1
N
FIT
Arabidopsis thaliana
AT2G28160
N
Bostr.27991s0112
Boechera stricta
Bostr.27991s0112
N
BRADI5G07720
Brachypodium distachyon
BRADI5G07720
N
Bo3g040310
Brassica oleracea
Bo3g040310
N
Bo4g071850
Brassica oleracea
Bo4g071850
N
Bo4g165090
Brassica oleracea
Bo4g165090
N
Bra000495
Brassica rapa
Bra000495
N
Bra011972
Brassica rapa
Bra011972
N
Bra034392
Brassica rapa
Bra034392
N
PK26582.1
Cannabis sativa
PK26582.1
N
Cagra.12562s0002
Capsella grandiflora
Cagra.12562s0002
N
Carubv10023654m.g
Capsella rubella
Carubv10023654m.g
N
evm.TU.contig_28125.2
Carica papaya
evm.TU.contig_28125.2
N
Ca_17453
Cicer arietinum
Ca_17453
N
Cla008847
Citrullus lanatus
Cla008847
N
Ciclev10003738m.g
Citrus clementina
Ciclev10003738m.g
N
Cucsa.385700
Cucumis sativus
Cucsa.385700
N
Eucgr.B03931
Eucalyptus grandis
Eucgr.B03931
N
Thhalv10016957m.g
Eutrema salsugineum
Thhalv10016957m.g
N
gene24607-v1.0-hybrid
Fragaria vesca
gene24607-v1.0-hybrid
N
gene24608-v1.0-hybrid
Fragaria vesca
gene24608-v1.0-hybrid
N
GLYMA12G08640
Glycine max
GLYMA12G08640
N
GLYMA11G19850
Glycine max
GLYMA11G19850
N
GLYMA13G39650
Glycine max
GLYMA13G39650
N
GLYMA12G30240
Glycine max
GLYMA12G30240
N
Gorai.009G090400
Gossypium raimondii
Gorai.009G090400
N
MLOC_6707
Hordeum vulgare
MLOC_6707
N
LPERR04G07210
Leersia perrieri
LPERR04G07210
N
chr3.CM0396.580.nc
Lotus japonicus
chr3.CM0396.580.nc
N
chr3.CM0070.320.nc
Lotus japonicus
chr3.CM0070.320.nc
N
cassava28523.m1
Manihot esculenta
cassava28523.m1
N
MTR_2g084280
Medicago truncatula
MTR_2g084280
N
mgf025442m
Mimulus guttatus
mgf025442m
N
mgf022253m
Mimulus guttatus
mgf022253m
N
GSMUA_Achr6G27600_001
Musa acuminata
GSMUA_Achr6G27600_001
N
OBART04G10120
Oryza barthii
OBART04G10120
N
OB04G17410
Oryza brachyantha
OB04G17410
N
ORGLA04G0072000
Oryza glaberrima
ORGLA04G0072000
N
ORGLA02G0343900
Oryza glaberrima
ORGLA02G0343900
N
OGLUM04G09730
Oryza glumaepatula
OGLUM04G09730
N
OLONG_016577
Oryza longistaminata
OLONG_016577
N
ONIVA04G07960
Oryza nivara
ONIVA04G07960
N
OPUNC04G08160
Oryza punctata
OPUNC04G08160
N
ORUFI04G11150
Oryza rufipogon
ORUFI04G11150
N
OS04G0381700
Oryza sativa
OS04G0381700
N
Pavir.J29678
Panicum virgatum
Pavir.J29678
N
Pavir.Ga01979
Panicum virgatum
Pavir.Ga01979
N
Pavir.J28741
Panicum virgatum
Pavir.J28741
N
PDK_20s1479721g001
Phoenix dactylifera
PDK_20s1479721g001
N
FIT1
Populus trichocarpa
POPTR_0009s01100
N
Pm001154
Prunus mume
Pm001154
N
PRUPE_ppa018718mg
Prunus persica
PRUPE_ppa018718mg
N
SapurV1A.1382s0060
Salix purpurea
SapurV1A.1382s0060
N
Si010533m.g
Setaria italica
Si010533m.g
N
Si010468m.g
Setaria italica
Si010468m.g
N
Solyc06g051550.2
Solanum lycopersicum
Solyc06g051550.2
N
PGSC0003DMG400019017
Solanum tuberosum
PGSC0003DMG400019017
N
Sb06g012030
Sorghum bicolor
Sb06g012030
N
TCM_041590
Theobroma cacao
TCM_041590
N
Traes_2DL_47E8C44C6
Triticum aestivum
Traes_2DL_47E8C44C6
N
Traes_2BL_F442E87DD
Triticum aestivum
Traes_2BL_F442E87DD
N
Traes_2AL_088338613
Triticum aestivum
Traes_2AL_088338613
N
FIT1
Vitis vinifera
VIT_06s0061g00720
N
GRMZM2G173521
Zea mays
GRMZM2G173521
N
GRMZM2G107672
Zea mays
GRMZM2G107672
N