ENSXMAG00000007553 (Xiphophorus maculatus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 ENSXMAG00000007553 T305223_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PGR
M03923_2.00 		Homo sapiens
DGNACANNNYGTNCY
RGNACRNNNTGTNCH		 SELEX
Nitta et al.(2015)
PGR_1 		0.992 0.886
PGR
M09266_2.00 		Homo sapiens
RGNACWBYBTGTNCYN
NRGNACAVRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_HUMAN.H11MO.0.A 		0.992 0.886
Pgr
M09326_2.00 		Mus musculus
RGNACWBYNTGTNCY
RGNACANRVWGTNCY		 Misc
Kulakovskiy et al.(2013)
PRGR_MOUSE.H11MO.0.A 		0.992 0.886
PGR
M09603_2.00 		Homo sapiens
RNACWNNNWGTNCHN
NDGNACWNNNWGTNY		 Misc
Heinz et al.(2010)
T47D-PR_GSE31130 		0.992 0.886
PGR
M11095_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_01 		0.992 0.886
PGR
M11096_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_02 		0.992 0.886
PGR
M11097_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PR_Q6 		0.992 0.886
NR3C2
M02395_2.00 		Homo sapiens
NNRGDACAN
NTGTHCYNN		 PBM
Weirauch et al.(2014)
pTH5924 		0.989 0.843
NR3C2
M03382_2.00 		Homo sapiens
NRGDACAHDRTGTHCYN
NRGDACAYHDTGTHCYN		 SELEX
Jolma et al.(2013)
NR3C2_1 		0.989 0.843
NR3C2
M05637_2.00 		Homo sapiens
NGNACRNNNYGTNCN
NGNACRNNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_HT-SELEX 		0.989 0.843
NR3C2
M05638_2.00 		Homo sapiens
NGNACRNNVYGTNCN
NGNACRBNNYGTNCN		 SELEX
Yin et al.(2017)
NR3C2_eDBD_Methyl-HT-SELEX 		0.989 0.843
Nr3c1
M05886_2.00 		Mus musculus
DGDACDBYNTGTNCY
RGNACANRVHGTHCH		 SMiLE-seq
Isakova et al.(2017)
GR 		0.989 0.843
Nr3c1
M09318_2.00 		Mus musculus
RGNACABYNTGTNCY
RGNACANRVTGTNCY		 Misc
Kulakovskiy et al.(2013)
GCR_MOUSE.H11MO.0.A 		0.989 0.843
Nr3c1
M09614_2.00 		Mus musculus
NRGDACABNNTGTNC
GNACANNVTGTHCYN		 Misc
Heinz et al.(2010)
RAW264.7-GRE_Unpublished 		0.989 0.843
NR3C1
M03366_2.00 		Homo sapiens
NRGWACAYNRTGTWCYH
DRGWACAYNRTGTWCYN		 SELEX
Jolma et al.(2013)
NR3C1_1 		0.984 0.829
NR3C1
M05587_2.00 		Homo sapiens
RGDACAYWDTGTHCY
RGDACAHWRTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_HT-SELEX 		0.984 0.829
NR3C1
M07986_2.00 		Homo sapiens
DGNACABYBTGTNC
GNACAVRVTGTNCH		 ChIP-seq
Gerstein et al.(2012)
A549_GR_HudsonAlpha 		0.984 0.829
NR3C1
M07987_2.00 		Homo sapiens
NNNNRGNACAYBBTGTHCYNN
NNRGDACAVVRTGTNCYNNNN		 ChIP-seq
Gerstein et al.(2012)
ECC-1_GR_HudsonAlpha 		0.984 0.829
NR3C1
M09270_2.00 		Homo sapiens
DGNACABKNTGTNCY
RGNACANMVTGTNCH		 Misc
Kulakovskiy et al.(2013)
GCR_HUMAN.H11MO.0.A 		0.984 0.829
NR3C1
M09607_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
A549-GR_GSE32465 		0.984 0.829
NR3C1
M11119_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_01 		0.984 0.829
NR3C1
M11120_2.00 		Homo sapiens
KKYACMRDVTGTYCTK
MAGRACABHYKGTRMM		 Transfac
Matys et al.(2006)
V$GRE_C 		0.984 0.829
NR3C1
M11121_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q4 		0.984 0.829
NR3C1
M11122_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_01 		0.984 0.829
NR3C1
M11123_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GR_Q6_02 		0.984 0.829
NR3C1
M11124_2.00 		Homo sapiens
NNWGVACANWDNNDNBHNN
NNDVNHNNHWNTGTBCWNN		 Transfac
Matys et al.(2006)
V$GR_Q6 		0.984 0.829
NR3C1
M11125_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NR3C1_04 		0.984 0.829
NR3C1
M05588_2.00 		Homo sapiens
RGDACANDRYGTHCY
RGDACRYHNTGTHCY		 SELEX
Yin et al.(2017)
NR3C1_eDBD_Methyl-HT-SELEX 		0.984 0.829
Ar
M00821_2.00 		Mus musculus
NRRGAACAYN
NRTGTTCYYN		 PBM
Weirauch et al.(2013)
pTH1739 		0.976 0.786
AR
M03389_2.00 		Homo sapiens
DRGWACRHVDYGTWCCY
RGGWACRHBDYGTWCYH		 SELEX
Jolma et al.(2013)
AR_1 		0.976 0.786
AR
M03390_2.00 		Homo sapiens
DRGWACAYNRTGTWCYY
RRGWACAYNRTGTWCYH		 SELEX
Jolma et al.(2013)
AR_2 		0.976 0.786
Ar
M03436_2.00 		Mus musculus
NRGHACAYNVYGTWCYN
NRGWACRBNRTGTDCYN		 SELEX
Jolma et al.(2013)
Ar_1 		0.976 0.786
AR
M09288_2.00 		Homo sapiens
DRYAAAYADNNNRGNACA
TGTNCYNNNHTRTTTRYH		 Misc
Kulakovskiy et al.(2013)
ANDR_HUMAN.H11MO.0.A 		0.976 0.786
Ar
M09331_2.00 		Mus musculus
NRGNACABRVTGTNCY
RGNACABYVTGTNCYN		 Misc
Kulakovskiy et al.(2013)
ANDR_MOUSE.H11MO.0.A 		0.976 0.786
AR
M09610_2.00 		Homo sapiens
NRGNACABNVTGTNCY
RGNACABNVTGTNCYN		 Misc
Heinz et al.(2010)
LNCAP-AR_GSE27824 		0.976 0.786
AR
M09609_2.00 		Homo sapiens
SHDRGVACAS
STGTBCYHDS		 Misc
Heinz et al.(2010)
LNCaP-AR_GSE27824 		0.976 0.786
AR
M11157_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_01 		0.976 0.786
AR
M11158_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_02 		0.976 0.786
AR
M11159_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_03 		0.976 0.786
AR
M11160_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_04 		0.976 0.786
AR
M11161_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_11 		0.976 0.786
AR
M11162_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_13 		0.976 0.786
AR
M11163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_14_H 		0.976 0.786
AR
M11164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q2 		0.976 0.786
AR
M11165_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6_01 		0.976 0.786
AR
M11166_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AR_Q6 		0.976 0.786
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSXMAP00000007578 Nuclear receptor 269 338

Links

Other Nuclear receptor family TFs
Other Xiphophorus maculatus TFs

271 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_01763 Arthroderma benhamiae ARB_01763 I
MCYG_02995 Arthroderma otae MCYG_02995 I
AGOS_ABL121C Ashbya gossypii AGOS_ABL121C I
ACLA_043000 Aspergillus clavatus CADACLAG00004293 N
CADAFLAG00012828 Aspergillus flavus CADAFLAG00012828 N
AFUA_8G02710 Aspergillus fumigatus CADAFUAG00001018 N
ANIA_08885 Aspergillus nidulans CADANIAG00007984 N
CADAORAG00004794 Aspergillus oryzae CADAORAG00004794 N
EURHEDRAFT_459391 Aspergillus ruber EURHEDRAFT_459391 N
ATEG_10383 Aspergillus terreus CADATEAG00001854 N
M437DRAFT_48354 Aureobasidium melanogenum M437DRAFT_48354 I
M438DRAFT_266991 Aureobasidium pullulans M438DRAFT_266991 I
AUEXF2481DRAFT_25000 Aureobasidium subglaciale AUEXF2481DRAFT_25000 I
Bcin06g00840 Botrytis cinerea Bcin06g00840 N
CaO19.10326 Candida albicans CaO19.10326 I
CaO19.12563 Candida albicans CaO19.12563 I
CaO19.2808 Candida albicans CaO19.2808 I
CaO19.5097 Candida albicans CaO19.5097 I
CD36_07720 Candida dubliniensis CD36_07720 I
CD36_83960 Candida dubliniensis CD36_83960 I
G210_4558 Candida maltosa G210_4558 I
G210_5363 Candida maltosa G210_5363 I
CTRG_02593 Candida tropicalis CTRG_02593 I
CTRG_03210 Candida tropicalis CTRG_03210 I
EPUS_00435 Endocarpon pusillum EPUS_00435 N
Ecym_4616 Eremothecium cymbalariae Ecym_4616 I
M7I_2684 Glarea lozoyensis M7I_2684 N
KAFR_0B03950 Kazachstania africana KAFR_0B03950 I
KLTH0C03762g Kluyveromyces thermotolerans KLTH0C03762g I
Kwal_10232 Kluyveromyces waltii Kwal_10232 I
PAS_chr2-1_0757 Komagataella pastoris PAS_chr2-1_0757 I
SAKL0D01342g Lachancea kluyveri SAKL0D01342g I
LALA0_S03e00276g Lachancea lanzarotensis LALA0_S03e00276g I
KLTH0C03762g Lachancea thermotolerans KLTH0C03762g I
MCYG_02995 Microsporum canis MCYG_02995 I
MGYG_00169 Microsporum gypseum MGYG_00169 I
UCRNP2_919 Neofusicoccum parvum UCRNP2_919 I
OIDMADRAFT_181255 Oidiodendron maius OIDMADRAFT_181255 N
OIDMADRAFT_87921 Oidiodendron maius OIDMADRAFT_87921 N
Pc16g00930 Penicillium chrysogenum Pc16g00930 N
PMAA_038670 Penicillium marneffei PMAA_038670 N
PDE_06878 Penicillium oxalicum PDE_06878 N
PCH_Pc16g00930 Penicillium rubens PCH_Pc16g00930 N
U727_00431840181 Penicillium solitum U727_00431840181 N
XP_002491690.1 Pichia pastoris XP_002491690.1 I
gwh1.2.1.110.1 Pichia stipitis gwh1.2.1.110.1 I
GMDG_00888 Pseudogymnoascus destructans GMDG_00888 N
V499_08444 Pseudogymnoascus pannorum V499_08444 N
19463_YMR280C Saccharomyces bayanus 19463_YMR280C I
CAT8 Saccharomyces cerevisiae YMR280C D
SKUD_207003 Saccharomyces kudriavzevii SKUD_207003 I
17487_YMR280C Saccharomyces mikatae 17487_YMR280C I
17891_YMR280C Saccharomyces paradoxus 17891_YMR280C I
AACERI_AaceriABL121C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABL121C I
PICST_622 Scheffersomyces stipitis PICST_622 I
SBOR_7151 Sclerotinia borealis SBOR_7151 N
SS1G_09184 Sclerotinia sclerotiorum SS1G_09184 N
PMAA_038670 Talaromyces marneffei PMAA_038670 N
TSTA_053320 Talaromyces stipitatus TSTA_053320 N
TDEL_0B00530 Torulaspora delbrueckii TDEL_0B00530 I
TEQG_08271 Trichophyton equinum TEQG_08271 I
H101_04897 Trichophyton interdigitale H101_04897 I
H102_08795 Trichophyton rubrum H102_08795 I
H105_08820 Trichophyton soudanense H105_08820 I
TESG_07986 Trichophyton tonsurans TESG_07986 I
TRV_01331 Trichophyton verrucosum TRV_01331 I
GSTUM_00004762001 Tuber melanosporum GSTUM_00004762001 I
BN7_5956 Wickerhamomyces ciferrii BN7_5956 I
ZBAI_00324 Zygosaccharomyces bailii ZBAI_00324 I
ZYRO0G14278g Zygosaccharomyces rouxii ZYRO0G14278g I