PPA10478 (Pristionchus pacificus)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 PPA10478 T305877_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
nhr-86
M02415_2.00 		Caenorhabditis elegans
KTGTAGTC
GACTACAM		 PBM
Weirauch et al.(2014)
pTH8598 		0.855 0.557
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA10478 Nuclear receptor 7 77

Links

Other Nuclear receptor family TFs
Other Pristionchus pacificus TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013404 Ailuropoda melanoleuca ENSAMEG00000013404 N 0.000
ENSAPLG00000010567 Anas platyrhynchos ENSAPLG00000010567 N 0.000
ARID2 Anolis carolinensis ENSACAG00000002402 N 0.000
Afo_R010305 Aptenodytes forsteri Afo_R010305 N 0.000
ENSAMXG00000012189 Astyanax mexicanus ENSAMXG00000012189 N 0.000
Brh_R012991 Buceros rhinoceros Brh_R012991 N 0.000
ARID2 Callithrix jacchus ENSCJAG00000013099 N 0.000
Aan_R012350 Calypte anna Aan_R012350 N 0.000
ARID2 Canis familiaris ENSCAFG00000009335 N 0.000
arid2 Danio rerio ENSDARG00000007413 N 0.000
ARID2 Felis catus ENSFCAG00000012831 N 0.000
ENSFALG00000010156 Ficedula albicollis ENSFALG00000010156 N 0.000
ENSGMOG00000016013 Gadus morhua ENSGMOG00000016013 N 0.000
ENSGALG00000009665 Gallus gallus ENSGALG00000009665 N 0.000
arid2 Gasterosteus aculeatus ENSGACG00000019522 N 0.000
Gfo_R004053 Geospiza fortis Gfo_R004053 N 0.000
ARID2 Gorilla gorilla ENSGGOG00000013896 N 0.000
ARID2 Homo sapiens ENSG00000189079 N 0.000
ENSSTOG00000008936 Ictidomys tridecemlineatus ENSSTOG00000008936 N 0.000
ENSLOCG00000016423 Lepisosteus oculatus ENSLOCG00000016423 N 0.000
ARID2 Meleagris gallopavo ENSMGAG00000009656 N 0.000
ENSMPUG00000000380 Mustela putorius furo ENSMPUG00000000380 N 0.000
Arid2 Mus musculus ENSMUSG00000033237 I 0.000
ENSNLEG00000017919 Nomascus leucogenys ENSNLEG00000017919 N 0.000
Ogr00113 Ophisaurus gracilis Ogr00113 N 0.000
ENSONIG00000011901 Oreochromis niloticus ENSONIG00000011901 N 0.000
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.000
ENSOARG00000019554 Ovis aries ENSOARG00000019554 N 0.000
ARID2 Pan troglodytes ENSPTRG00000004853 N 0.000
ENSPFOG00000011270 Poecilia formosa ENSPFOG00000011270 N 0.000
Pvit_11514 Pogona vitticeps Pvit_11514 N 0.000
ENSPPYG00000004433 Pongo abelii ENSPPYG00000004433 N 0.000
ARID2 Procavia capensis ENSPCAG00000015312 N 0.000
Arid2 Rattus norvegicus ENSRNOG00000004831 N 0.000
ENSTGUG00000006070 Taeniopygia guttata ENSTGUG00000006070 N 0.000
arid2 Takifugu rubripes ENSTRUG00000004073 N 0.000
ENSTSYG00000008152 Tarsius syrichta ENSTSYG00000008152 N 0.000
arid2 Tetraodon nigroviridis ENSTNIG00000005771 N 0.000
arid2 Xenopus tropicalis XB-GENE-6070950 N 0.000