TC003409 (Tribolium castaneum)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00105 (zf-C4) IPR001628 TC003409 T306069_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AGAP010438
M02389_2.00 		Anopheles gambiae
NRGDKCRNN
NNYGMHCYN		 PBM
Weirauch et al.(2014)
pTH6429 		0.983 0.929
eg
M03927_2.00 		Drosophila melanogaster
NAAAYTRGAKCA
TGMTCYARTTTN		 SELEX
Nitta et al.(2015)
eg_1 		0.981 0.914
eg
M06415_2.00 		Drosophila melanogaster
RAAANTAGRGCAV
BTGCYCTANTTTY		 B1H
Zhu et al.(2011)
eg_SANGER_5_FBgn0000560 		0.981 0.914
knrl
M03930_2.00 		Drosophila melanogaster
AWNTRGRKCAN
NTGMYCYANWT		 SELEX
Nitta et al.(2015)
knrl_1 		0.981 0.900
knrl
M03931_2.00 		Drosophila melanogaster
AWBBGTAACR
YGTTACVVWT		 SELEX
Nitta et al.(2015)
knrl_2 		0.981 0.900
knrl
M06422_2.00 		Drosophila melanogaster
AAABTRGRKCA
TGMYCYAVTTT		 B1H
Zhu et al.(2011)
knrl_SANGER_5_FBgn0001323 		0.981 0.900
kni
M06557_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Mathelier et al.(2014)
MA0451.1 		0.975 0.857
kni
M06419_2.00 		Drosophila melanogaster
RAWNKVGNWC
GWNCBMNWTY		 B1H
Zhu et al.(2011)
kni_FlyReg_FBgn0001320 		0.975 0.857
kni
M06420_2.00 		Drosophila melanogaster
AAWNTAGRGCAV
BTGCYCTANWTT		 B1H
Zhu et al.(2011)
kni_NAR_FBgn0001320 		0.975 0.857
kni
M06421_2.00 		Drosophila melanogaster
RWAANTRGRNCA
TGNYCYANTTWY		 B1H
Zhu et al.(2011)
kni_SANGER_5_FBgn0001320 		0.975 0.857
kni
M08225_2.00 		Drosophila melanogaster
YAGNGYTGYC
GRCARCNCTR		 ChIP-seq
Contrino et al.(2012)
Mf24 		0.975 0.857
kni
M09687_2.00 		Drosophila melanogaster
NAAWNKRGADCAV
BTGHTCYMNWTTN		 Misc
Kulakovskiy et al.(2009)
kni 		0.975 0.857
kni
M11189_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$KNI_Q6 		0.975 0.857
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC003409-PA Nuclear receptor 3 73

Links

Other Nuclear receptor family TFs
Other Tribolium castaneum TFs

102 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSP00000415939-D1 Bos grunniens ENSP00000415939-D1 N
ZBED5 Bos taurus ENSBTAG00000010568 N
ZBED5 Callithrix jacchus ENSCJAG00000010619 N
ZBED5 Canis familiaris ENSCAFG00000028815 N
ENSCSAG00000004621 Chlorocebus sabaeus ENSCSAG00000004621 N
ZBED5 Equus caballus ENSECAG00000006542 N
ZBED5 Felis catus ENSFCAG00000000411 N
ZBED5 Gorilla gorilla ENSGGOG00000027515 N
ZBED5 Homo sapiens ENSG00000236287 N
ENSSTOG00000013620 Ictidomys tridecemlineatus ENSSTOG00000013620 N
ENSMMUP00000036967 Macaca fascicularis ENSMMUP00000036967 N
ZBED5 Macaca mulatta ENSMMUG00000006652 N
ENSMPUG00000018990 Mustela putorius furo ENSMPUG00000018990 N
ZBED5 Myotis lucifugus ENSMLUG00000011818 N
ENSNLEG00000017642 Nomascus leucogenys ENSNLEG00000017642 N
ENSOARG00000017129 Ovis aries ENSOARG00000017129 N
ZBED5 Pan troglodytes ENSPTRG00000040343 N
ENSPPYG00000003484 Pongo abelii ENSPPYG00000003484 N
ZBED5 Sorex araneus ENSSARG00000012024 N
ZBED5 Tupaia belangeri ENSTBEG00000016883 N