CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Minc17667
(
Meloidogyne incognita
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
Minc17667
T307438_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc17667
Nuclear receptor
20
89
TRCCICGNIASGFIYYNVMCCDGCKHFFRRSLNAQELFKCKSDGNCDLMKASNKCKSCRFDKCILMGMNI
Links
Other
Nuclear receptor
family TFs
Other
Meloidogyne incognita
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
maker-nMf.1.1.scaf11763-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf11763-augustus-gene-0.3
N
0.928
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf10396-processed-gene-0.0
N
0.933
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
Meloidogyne floridensis
augustus_masked-nMf.1.1.scaf06920-processed-gene-0.0
N
0.938
maker-nMf.1.1.scaf00198-snap-gene-0.24
Meloidogyne floridensis
maker-nMf.1.1.scaf00198-snap-gene-0.24
N
0.987
maker-nMf.1.1.scaf01969-augustus-gene-0.11
Meloidogyne floridensis
maker-nMf.1.1.scaf01969-augustus-gene-0.11
N
0.770
maker-nMf.1.1.scaf03265-augustus-gene-0.7
Meloidogyne floridensis
maker-nMf.1.1.scaf03265-augustus-gene-0.7
N
0.910
maker-nMf.1.1.scaf06148-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf06148-augustus-gene-0.3
N
0.750
maker-nMf.1.1.scaf06196-snap-gene-0.8
Meloidogyne floridensis
maker-nMf.1.1.scaf06196-snap-gene-0.8
N
0.928
maker-nMf.1.1.scaf06884-augustus-gene-0.5
Meloidogyne floridensis
maker-nMf.1.1.scaf06884-augustus-gene-0.5
N
0.808
maker-nMf.1.1.scaf08255-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf08255-snap-gene-0.4
N
0.940
maker-nMf.1.1.scaf14574-augustus-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf14574-augustus-gene-0.4
N
0.919
maker-nMf.1.1.scaf15444-snap-gene-0.4
Meloidogyne floridensis
maker-nMf.1.1.scaf15444-snap-gene-0.4
N
0.935
MhA1_Contig988.frz3.gene1
Meloidogyne hapla
MhA1_Contig988.frz3.gene1
N
0.888
MhA1_Contig1386.frz3.gene10
Meloidogyne hapla
MhA1_Contig1386.frz3.gene10
N
0.957
MhA1_Contig2339.frz3.gene1
Meloidogyne hapla
MhA1_Contig2339.frz3.gene1
N
0.891
MhA1_Contig2339.frz3.gene2
Meloidogyne hapla
MhA1_Contig2339.frz3.gene2
N
0.913
MhA1_Contig41.frz3.gene12
Meloidogyne hapla
MhA1_Contig41.frz3.gene12
N
0.872
MhA1_Contig790.frz3.gene2
Meloidogyne hapla
MhA1_Contig790.frz3.gene2
N
0.929
MhA1_Contig790.frz3.gene5
Meloidogyne hapla
MhA1_Contig790.frz3.gene5
N
0.929
Minc09143
Meloidogyne incognita
Minc09143
N
0.808
Minc02054
Meloidogyne incognita
Minc02054
N
0.852
Minc02055
Meloidogyne incognita
Minc02055
N
0.808
Minc03976
Meloidogyne incognita
Minc03976
N
0.987
Minc04725
Meloidogyne incognita
Minc04725
N
0.928
Minc07962
Meloidogyne incognita
Minc07962
N
0.852
Minc07964
Meloidogyne incognita
Minc07964
N
0.852
Minc09140
Meloidogyne incognita
Minc09140
N
0.852
Minc09142
Meloidogyne incognita
Minc09142
N
0.808
Minc18991
Meloidogyne incognita
Minc18991
N
0.980
Minc13321
Meloidogyne incognita
Minc13321
N
0.908
Minc13448
Meloidogyne incognita
Minc13448
N
0.928
Minc14854
Meloidogyne incognita
Minc14854
N
0.919
Minc15187
Meloidogyne incognita
Minc15187
N
0.803
Minc15189
Meloidogyne incognita
Minc15189
N
0.859
Minc17464
Meloidogyne incognita
Minc17464
N
0.908
Minc18661
Meloidogyne incognita
Minc18661
N
0.933