CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACAC_0001180201
(
Angiostrongylus cantonensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ACAC_0001180201
T307905_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-3
M00687_2.00
Caenorhabditis elegans
NNHGDHYANN
NNTRDHCDNN
PBM
Narasimhan et al.(2015)
pTH9163
0.893
0.657
nhr-7
M00689_2.00
Caenorhabditis elegans
WAAGAYCAN
NTGRTCTTW
PBM
Narasimhan et al.(2015)
pTH10645
0.809
0.600
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACAC_0001180201-mRNA-1
Nuclear receptor
25
94
GVCMVCGDRSAGKHYGVMACYGCKGFFRRTIRSGQNYSCRFQRKCSIDKDQRNACRFCRFQRCLNVGMEP
Links
Other
Nuclear receptor
family TFs
Other
Angiostrongylus cantonensis
TFs
187 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00111p00072510
Amborella trichopoda
AMTR_s00111p00072510
N
Aquca_002_00029
Aquilegia coerulea
Aquca_002_00029
N
cassava17368.m1
Manihot esculenta
cassava17368.m1
N
cassava19913.m1
Manihot esculenta
cassava19913.m1
N
GSMUA_Achr1G01660_001
Musa acuminata
GSMUA_Achr1G01660_001
N
gw1.114.172.1
Physcomitrella patens
gw1.114.172.1
N
SELMODRAFT_116971
Selaginella moellendorffii
SELMODRAFT_116971
N
SELMODRAFT_118852
Selaginella moellendorffii
SELMODRAFT_118852
N