CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOC_0000352001
(
Angiostrongylus costaricensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
ACOC_0000352001
T307919_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOC_0000352001-mRNA-1
Nuclear receptor
10
77
SICRVCGDKAFSYNFNVITCESCKAFFRRNANKREIRCPFNEQCEINVVSRRFCQRCRLAKCFGVSSV
Links
Other
Nuclear receptor
family TFs
Other
Angiostrongylus costaricensis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACAC_0001358501
Angiostrongylus cantonensis
ACAC_0001358501
I
0.938
BXY_1432000
Bursaphelenchus xylophilus
BXY_1432000
I
0.867
CBN06351
Caenorhabditis brenneri
CBN06351
I
0.920
CBG07759
Caenorhabditis briggsae
CBG07759
I
0.920
nhr-48
Caenorhabditis elegans
WBGene00003638
I
0.950
CJA03214
Caenorhabditis japonica
CJA03214
I
0.930
CRE19106
Caenorhabditis remanei
CRE19106
I
0.920
DICVIV_03942
Dictyocaulus viviparus
DICVIV_03942
I
0.938
HCOI01526000
Haemonchus contortus
HCOI01526000
I
0.938
HPLM_0001602501
Haemonchus placei
HPLM_0001602501
I
0.961
ISCW009328
Ixodes scapularis
ISCW009328
I
0.818
MhA1_Contig1158.frz3.gene18
Meloidogyne hapla
MhA1_Contig1158.frz3.gene18
I
0.870
Minc18589
Meloidogyne incognita
Minc18589
I
0.870
Minc13296
Meloidogyne incognita
Minc13296
I
0.870
NECAME_01947
Necator americanus
NECAME_01947
I
0.938
scaffold1545-EXSNAP2012.2
Pristionchus exspectatus
scaffold1545-EXSNAP2012.2
I
0.863
Ppa-nhr-48
Pristionchus pacificus
PPA20177
I
0.863
L596_g9326
Steinernema carpocapsae
L596_g9326
I
0.875
L893_g8292
Steinernema glaseri
L893_g8292
I
0.877
L898_g1817
Steinernema monticolum
L898_g1817
I
0.875
L892_g26350
Steinernema scapterisci
L892_g26350
I
0.875
SVUK_0001112701
Strongylus vulgaris
SVUK_0001112701
I
0.938
SMUV_0000312501
Syphacia muris
SMUV_0000312501
I
0.863
TELCIR_04889
Teladorsagia circumcincta
TELCIR_04889
I
0.938