CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L898_g20180
(
Steinernema monticolum
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
L898_g20180
T309457_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nhr-142
M00703_2.00
Caenorhabditis elegans
RGTCACAR
YTGTGACY
PBM
Narasimhan et al.(2015)
pTH10714
0.809
0.552
For this family, TFs with SR scores >
0.745
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g20180.t1
Nuclear receptor
15
82
RFCQVCGGTAHGIHFQVLTCRSCAAFFKRSVDVSNRFRCMRASENCDVTKRKCRLCRFKRCVDLGMTL
Links
Other
Nuclear receptor
family TFs
Other
Steinernema monticolum
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB00587.1
Alternaria brassicicola
AB00587.1
I
BBA_08203
Beauveria bassiana
BBA_08203
I
COCC4DRAFT_156489
Bipolaris maydis
COCC4DRAFT_156489
I
COCMIDRAFT_81410
Bipolaris oryzae
COCMIDRAFT_81410
I
COCSADRAFT_166493
Bipolaris sorokiniana
COCSADRAFT_166493
I
COCVIDRAFT_12975
Bipolaris victoriae
COCVIDRAFT_12975
I
COCCADRAFT_9692
Bipolaris zeicola
COCCADRAFT_9692
I
BGHDH14_bgh01891
Blumeria graminis
BGHDH14_bgh01891
I
CaO19.8813
Candida albicans
CaO19.8813
I
CD36_07140
Candida dubliniensis
CD36_07140
I
CLUG_05915
Candida lusitaniae
CLUG_05915
N
CTRG_03975
Candida tropicalis
CTRG_03975
N
A1O1_01627
Capronia coronata
A1O1_01627
N
PV04_00855
Capronia semiimmersa
PV04_00855
I
G647_01190
Cladophialophora carrionii
G647_01190
I
PV07_00139
Cladophialophora immunda
PV07_00139
I
A1O7_01132
Cladophialophora yegresii
A1O7_01132
I
CLUG_05915
Clavispora lusitaniae
CLUG_05915
N
estExt_fgenesh1_pg.C_20387
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20387
I
CCM_00925
Cordyceps militaris
CCM_00925
I
HMPREF1120_00016
Exophiala dermatitidis
HMPREF1120_00016
N
PV11_06966
Exophiala sideris
PV11_06966
I
Z517_04525
Fonsecaea pedrosoi
Z517_04525
I
Z517_01830
Fonsecaea pedrosoi
Z517_01830
I
NechaG102141
Fusarium solani
NechaG102141
N
LEMA_P036570.1
Leptosphaeria maculans
LEMA_P036570.1
I
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
Nectria haematococca
estExt_fgenesh1_pg.C_sca_29_chr12_4_00173
N
ff-7
Neurospora crassa
NCU04001
D
scaffold_6-snap.550.1
Neurospora discreta
scaffold_6-snap.550.1
I
NEUTE1DRAFT_49802
Neurospora tetrasperma
NEUTE1DRAFT_49802
I
PMAA_046250
Penicillium marneffei
PMAA_046250
I
PFICI_06028
Pestalotiopsis fici
PFICI_06028
I
SNOG_08674
Phaeosphaeria nodorum
SNOG_08674
N
PODANS_4_2530
Podospora anserina
PODANS_4_2530
I
PTT_17743
Pyrenophora teres
PTT_17743
I
PTRG_08944
Pyrenophora triticirepentis
PTRG_08944
I
SAPIO_CDS8046
Scedosporium apiospermum
SAPIO_CDS8046
I
SMAC_06177
Sordaria macrospora
SMAC_06177
I
SNOG_08674
Stagonospora nodorum
SNOG_08674
N
PMAA_046250
Talaromyces marneffei
PMAA_046250
I
TSTA_035500
Talaromyces stipitatus
TSTA_035500
I
VHEMI00428
Torrubiella hemipterigena
VHEMI00428
I