CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000088601
(
Nippostrongylus brasiliensis
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
NBR_0000088601
T309712_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000088601-mRNA-1
Nuclear receptor
11
77
TLCVVCEDIATGNHYSVPSCNGCKTFFRRAVVNNRTFTCMGNGDCPVNKAIQNDRDRIGYTKRTRKS
Links
Other
Nuclear receptor
family TFs
Other
Nippostrongylus brasiliensis
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_20638
Aegilops tauschii
F775_20638
I
AMTR_s00018p00071850
Amborella trichopoda
AMTR_s00018p00071850
I
AMTR_s00018p00074980
Amborella trichopoda
AMTR_s00018p00074980
I
AMTR_s00022p00160350
Amborella trichopoda
AMTR_s00022p00160350
I
Aquca_009_00966
Aquilegia coerulea
Aquca_009_00966
I
ANAC001
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_1000119
I
anac069
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_6002854
I
NAC69
Arabidopsis thaliana
AT4G01550
D
Bostr.0556s0555
Boechera stricta
Bostr.0556s0555
I
Bostr.4825s0023
Boechera stricta
Bostr.4825s0023
I
Bostr.5325s0009
Boechera stricta
Bostr.5325s0009
I
Bostr.5325s0019
Boechera stricta
Bostr.5325s0019
I
Bo00853s060
Brassica oleracea
Bo00853s060
I
Bo5g002850
Brassica oleracea
Bo5g002850
I
Bo9g004070
Brassica oleracea
Bo9g004070
I
Bo9g004110
Brassica oleracea
Bo9g004110
I
Bra008553
Brassica rapa
Bra008553
I
Bra027596
Brassica rapa
Bra027596
I
Bra036328
Brassica rapa
Bra036328
I
Cagra.1968s0045
Capsella grandiflora
Cagra.1968s0045
I
Cagra.27691s0001
Capsella grandiflora
Cagra.27691s0001
I
Carubv10003260m.g
Capsella rubella
Carubv10003260m.g
I
Carubv10009049m.g
Capsella rubella
Carubv10009049m.g
I
Carubv10009451m.g
Capsella rubella
Carubv10009451m.g
I
evm.TU.contig_29561
Carica papaya
evm.TU.contig_29561
I
Ca_04069
Cicer arietinum
Ca_04069
I
Ca_20988
Cicer arietinum
Ca_20988
I
Ca_27204
Cicer arietinum
Ca_27204
I
orange1.1g021772m.g
Citrus sinensis
orange1.1g021772m.g
N
Eucgr.J00531
Eucalyptus grandis
Eucgr.J00531
I
Eucgr.K02303
Eucalyptus grandis
Eucgr.K02303
I
Thhalv10007665m.g
Eutrema salsugineum
Thhalv10007665m.g
I
Thhalv10012158m.g
Eutrema salsugineum
Thhalv10012158m.g
I
Thhalv10028684m.g
Eutrema salsugineum
Thhalv10028684m.g
I
gene08448-v1.0-hybrid
Fragaria vesca
gene08448-v1.0-hybrid
I
gene18589-v1.0-hybrid
Fragaria vesca
gene18589-v1.0-hybrid
N
gene35013-v1.0-hybrid
Fragaria vesca
gene35013-v1.0-hybrid
N
gene35014-v1.0-hybrid
Fragaria vesca
gene35014-v1.0-hybrid
I
GLYMA12G31211
Glycine max
GLYMA12G31211
I
GLYMA14G36840
Glycine max
GLYMA14G36840
I
Gorai.004G125900
Gossypium raimondii
Gorai.004G125900
I
Gorai.006G203800
Gossypium raimondii
Gorai.006G203800
I
MLOC_13932
Hordeum vulgare
MLOC_13932
I
MLOC_37843
Hordeum vulgare
MLOC_37843
I
MLOC_65286
Hordeum vulgare
MLOC_65286
I
MLOC_75297
Hordeum vulgare
MLOC_75297
N
LPERR04G17350
Leersia perrieri
LPERR04G17350
I
LPERR07G06440
Leersia perrieri
LPERR07G06440
I
LPERR08G17020
Leersia perrieri
LPERR08G17020
I
LPERR09G14720
Leersia perrieri
LPERR09G14720
I
Lus10032919.g
Linum usitatissimum
Lus10032919.g
I
chr1.LjT41E18.160.nc
Lotus japonicus
chr1.LjT41E18.160.nc
I
MDP0000282616
Malus domestica
MDP0000282616
I
MDP0000575835
Malus domestica
MDP0000575835
I
cassava29774.valid.m1
Manihot esculenta
cassava29774.valid.m1
I
cassava29775.valid.m1
Manihot esculenta
cassava29775.valid.m1
I
MTR_3g093050
Medicago truncatula
MTR_3g093050
I
MTR_5g069030
Medicago truncatula
MTR_5g069030
I
MTR_8g023840
Medicago truncatula
MTR_8g023840
I
MTR_8g023860
Medicago truncatula
MTR_8g023860
I
mgf022344m
Mimulus guttatus
mgf022344m
I
GSMUA_Achr11G16860_001
Musa acuminata
GSMUA_Achr11G16860_001
I
GSMUA_Achr3G00330_001
Musa acuminata
GSMUA_Achr3G00330_001
I
GSMUA_Achr7G21780_001
Musa acuminata
GSMUA_Achr7G21780_001
I
GSMUA_Achr9G10040_001
Musa acuminata
GSMUA_Achr9G10040_001
I
GSMUA_AchrUn_randomG04060_001
Musa acuminata
GSMUA_AchrUn_randomG04060_001
I
OBART06G00060
Oryza barthii
OBART06G00060
N
OB09G25590
Oryza brachyantha
OB09G25590
I
ORGLA06G0000500
Oryza glaberrima
ORGLA06G0000500
N
ORGLA08G0177600
Oryza glaberrima
ORGLA08G0177600
I
ORGLA09G0151800
Oryza glaberrima
ORGLA09G0151800
I
OGLUM06G00040
Oryza glumaepatula
OGLUM06G00040
N
OGLUM08G21360
Oryza glumaepatula
OGLUM08G21360
I
OGLUM09G19480
Oryza glumaepatula
OGLUM09G19480
I
BGIOSGA022116
Oryza indica
BGIOSGA022116
N
BGIOSGA026695
Oryza indica
BGIOSGA026695
I
BGIOSGA031230
Oryza indica
BGIOSGA031230
I
OLONG_004904
Oryza longistaminata
OLONG_004904
N
OMERI06G00050
Oryza meridionalis
OMERI06G00050
N
OMERI09G14170
Oryza meridionalis
OMERI09G14170
I
ONIVA06G00080
Oryza nivara
ONIVA06G00080
N
ONIVA08G22710
Oryza nivara
ONIVA08G22710
I
ONIVA09G20130
Oryza nivara
ONIVA09G20130
I
OPUNC08G18240
Oryza punctata
OPUNC08G18240
I
ORUFI06G00070
Oryza rufipogon
ORUFI06G00070
N
ORUFI08G22550
Oryza rufipogon
ORUFI08G22550
I
OS06G0101800
Oryza sativa
OS06G0101800
N
OS08G0511200
Oryza sativa
OS08G0511200
I
Pavir.Ba01386
Panicum virgatum
Pavir.Ba01386
I
Pavir.Bb02626
Panicum virgatum
Pavir.Bb02626
I
e_gw1.117.35.1
Physcomitrella patens
e_gw1.117.35.1
I
e_gw1.140.53.1
Physcomitrella patens
e_gw1.140.53.1
I
e_gw1.164.18.1
Physcomitrella patens
e_gw1.164.18.1
I
e_gw1.164.26.1
Physcomitrella patens
e_gw1.164.26.1
I
e_gw1.259.4.1
Physcomitrella patens
e_gw1.259.4.1
I
e_gw1.5.134.1
Physcomitrella patens
e_gw1.5.134.1
I
POPTR_0002s15560
Populus trichocarpa
POPTR_0002s15560
I
POPTR_0002s18290
Populus trichocarpa
POPTR_0002s18290
I
POPTR_0002s18310
Populus trichocarpa
POPTR_0002s18310
I
POPTR_0014s07210
Populus trichocarpa
POPTR_0014s07210
I
POPTR_0014s10330
Populus trichocarpa
POPTR_0014s10330
I
POPTR_0014s10350
Populus trichocarpa
POPTR_0014s10350
I
POPTR_0014s10360
Populus trichocarpa
POPTR_0014s10360
I
Pm019659
Prunus mume
Pm019659
I
PRUPE_ppa008321mg
Prunus persica
PRUPE_ppa008321mg
N
SapurV1A.0003s0310
Salix purpurea
SapurV1A.0003s0310
N
SapurV1A.0003s0330
Salix purpurea
SapurV1A.0003s0330
I
SapurV1A.0024s0340
Salix purpurea
SapurV1A.0024s0340
I
SapurV1A.0093s0260
Salix purpurea
SapurV1A.0093s0260
I
SapurV1A.0162s0450
Salix purpurea
SapurV1A.0162s0450
I
SapurV1A.0321s0340
Salix purpurea
SapurV1A.0321s0340
I
SapurV1A.0321s0350
Salix purpurea
SapurV1A.0321s0350
I
SapurV1A.0321s0360
Salix purpurea
SapurV1A.0321s0360
I
SapurV1A.0365s0200
Salix purpurea
SapurV1A.0365s0200
I
SapurV1A.0586s0170
Salix purpurea
SapurV1A.0586s0170
I
Si032702m.g
Setaria italica
Si032702m.g
I
Solyc03g080090.2
Solanum lycopersicum
Solyc03g080090.2
I
PGSC0003DMG400000555
Solanum tuberosum
PGSC0003DMG400000555
I
Sb02g026510
Sorghum bicolor
Sb02g026510
I
Sb02g032230
Sorghum bicolor
Sb02g032230
I
TCM_015535
Theobroma cacao
TCM_015535
I
TCM_019937
Theobroma cacao
TCM_019937
N
Traes_4AL_22CE41C6F
Triticum aestivum
Traes_4AL_22CE41C6F
N
Traes_5BL_8BE382FE3
Triticum aestivum
Traes_5BL_8BE382FE3
I
Traes_5DL_B69423A67
Triticum aestivum
Traes_5DL_B69423A67
I
Traes_7AL_74CC91D39
Triticum aestivum
Traes_7AL_74CC91D39
I
TRIUR3_13805
Triticum urartu
TRIUR3_13805
I
VIT_06s0004g00020
Vitis vinifera
VIT_06s0004g00020
I
GRMZM2G003715
Zea mays
GRMZM2G003715
I
GRMZM2G139700
Zea mays
GRMZM2G139700
I