TTAC_0000874101 (Hydatigera taeniaeformis)
Nuclear receptor

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00105 (zf-C4) IPR001628 TTAC_0000874101 T310934_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
THRB
M03379_2.00 		Homo sapiens
DTGACCTBATVAGGTCAN
NTGACCTBATVAGGTCAH		 SELEX
Jolma et al.(2013)
THRB_1 		0.937 0.643
THRB
M03380_2.00 		Homo sapiens
DTGACCTBANTRAGGTCAH
DTGACCTYANTVAGGTCAH		 SELEX
Jolma et al.(2013)
THRB_2 		0.937 0.643
THRB
M03381_2.00 		Homo sapiens
NTGWCCTYADNTRAGGTCAH
DTGACCTYANHTRAGGWCAN		 SELEX
Jolma et al.(2013)
THRB_3 		0.937 0.643
THRB
M05629_2.00 		Homo sapiens
NRGGTCAAAGGTCRN
NYGACCTTTGACCYN		 SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_1 		0.937 0.643
THRB
M05630_2.00 		Homo sapiens
NRRGGTCAYGACCYYN
NRRGGTCRTGACCYYN		 SELEX
Yin et al.(2017)
THRB_eDBD_HT-SELEX_2 		0.937 0.643
THRB
M05633_2.00 		Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN		 SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_1 		0.937 0.643
THRB
M05634_2.00 		Homo sapiens
TRAGGTCABVYVAGGTCAH
DTGACCTBRBVTGACCTYA		 SELEX
Yin et al.(2017)
THRB_FL_HT-SELEX_2 		0.937 0.643
THRB
M09285_2.00 		Homo sapiens
VRVSYVABVKSAGGWCA
TGWCCTSMBVTBRSBYB		 Misc
Kulakovskiy et al.(2013)
THB_HUMAN.H11MO.0.C 		0.937 0.643
THRB
M11150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RBETA_Q6_01 		0.937 0.643
THRB
M05631_2.00 		Homo sapiens
NRGGTYRDRGGKYRN
NYRMCCYHYRACCYN		 SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_1 		0.937 0.643
THRB
M05632_2.00 		Homo sapiens
NNRGGTCAYGACCYBN
NVRGGTCRTGACCYNN		 SELEX
Yin et al.(2017)
THRB_eDBD_Methyl-HT-SELEX_2 		0.937 0.643
THRB
M05635_2.00 		Homo sapiens
NTGWCCTBRNYVAGGWCAN
NTGWCCTBRNYVAGGWCAN		 SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_1 		0.937 0.643
THRB
M05636_2.00 		Homo sapiens
YRAGGWCAYGYRAGGWCAH
DTGWCCTYRCRTGWCCTYR		 SELEX
Yin et al.(2017)
THRB_FL_Methyl-HT-SELEX_2 		0.937 0.643
GAG_AVIER
M11193_2.00 		Avian erythroblastosis virus
VHNTRAGGTCACSSNN
NNSSGTGACCTYANDB		 Transfac
Matys et al.(2006)
V$T3R_01 		0.927 0.629
THRA
M03368_2.00 		Homo sapiens
DTGACCTYATVAGGTCAH
DTGACCTBATRAGGTCAH		 SELEX
Jolma et al.(2013)
THRA_1 		0.921 0.643
THRA
M09275_2.00 		Homo sapiens
RGKWSDNNYVAGGWSAN
NTSWCCTBRNNHSWMCY		 Misc
Kulakovskiy et al.(2013)
THA_HUMAN.H11MO.0.C 		0.921 0.643
Thra
M09333_2.00 		Mus musculus
VRGGKCANNYVRGGHCA
TGDCCYBRNNTGMCCYB		 Misc
Kulakovskiy et al.(2013)
THA_MOUSE.H11MO.0.C 		0.921 0.643
Thra
M09619_2.00 		Mus musculus
GGKCANNYVRGGHCA
TGDCCYBRNNTGMCC		 Misc
Heinz et al.(2010)
C17.2-THRa_GSE38347 		0.921 0.643
THRA
M11135_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$T3RALPHA_Q6 		0.921 0.643
Q95WG3_ACRMI
M02424_2.00 		Acropora millepora
NRAGGTCAN
NTGACCTYN		 PBM
Weirauch et al.(2014)
pTH6144 		0.825 0.629
Q6VU64_APLCA
M02423_2.00 		Aplysia californica
NRGGTCAN
NTGACCYN		 PBM
Weirauch et al.(2014)
pTH6055 		0.804 0.500
Hr4
M06435_2.00 		Drosophila melanogaster
AAGGTCA
TGACCTT		 B1H
Zhu et al.(2011)
Hr4_SANGER_5_FBgn0023546 		0.781 0.514
ENSPMAG00000000180
M02403_2.00 		Petromyzon marinus
RGKWCRN
NYGWMCY		 PBM
Weirauch et al.(2014)
pTH5509 		0.779 0.557
VDR
M03363_2.00 		Homo sapiens
GRGTTCAYHGRGTTCA
TGAACYCDRTGAACYC		 SELEX
Jolma et al.(2013)
VDR_1 		0.770 0.600
Vdr
M03429_2.00 		Mus musculus
RRGTTCAYHGRGTTCA
TGAACYCDRTGAACYY		 SELEX
Jolma et al.(2013)
Vdr_1 		0.770 0.600
VDR
M05877_2.00 		Homo sapiens
HRRGTTCA
TGAACYYD		 SMiLE-seq
Isakova et al.(2017)
VDR 		0.770 0.600
VDR
M09269_2.00 		Homo sapiens
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_HUMAN.H11MO.0.A 		0.770 0.600
Vdr
M09315_2.00 		Mus musculus
NRGGKCANNGRGKKCR
YGMMCYCNNTGMCCYN		 Misc
Kulakovskiy et al.(2013)
VDR_MOUSE.H11MO.0.A 		0.770 0.600
VDR
M09606_2.00 		Homo sapiens
NRRGGTCANNRRGKKCANNN
NNNTGMMCYYNNTGACCYYN		 Misc
Heinz et al.(2010)
GM10855-VDR+vitD_GSE22484 		0.770 0.600
VDR
M11116_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q3 		0.770 0.600
VDR
M11117_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6_01 		0.770 0.600
VDR
M11118_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$VDR_Q6 		0.770 0.600
EcR
M06414_2.00 		Drosophila melanogaster
RAGGTCAW
WTGACCTY		 B1H
Zhu et al.(2011)
EcR_SANGER_5_FBgn0000546 		0.757 0.571
Rorc
M09324_2.00 		Mus musculus
NDAWSTRRGTCA
TGACYYASWTHN		 Misc
Kulakovskiy et al.(2013)
RORG_MOUSE.H11MO.0.B 		0.753 0.514
Rorc
M09617_2.00 		Mus musculus
AWBTRGGTCA
TGACCYAVWT		 Misc
Heinz et al.(2010)
EL4-RORgt.Flag_GSE56019 		0.753 0.514
For this family, TFs with SR scores > 0.745 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TTAC_0000874101-mRNA-1 Nuclear receptor 26 96

Links

Other Nuclear receptor family TFs
Other Hydatigera taeniaeformis TFs

519 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g03172 Acanthocheilonema viteae nAv.1.0.1.g03172 I
nAv.1.0.1.g05129 Acanthocheilonema viteae nAv.1.0.1.g05129 I
nAv.1.0.1.g05865 Acanthocheilonema viteae nAv.1.0.1.g05865 I
AAEL005147 Aedes aegypti AAEL005147 I
ENSAMEG00000000981 Ailuropoda melanoleuca ENSAMEG00000000981 I
Alligator_sinensis_CCG020447.1 Alligator sinensis Alligator_sinensis_CCG020447.1 I
ANCCAN_05238 Ancylostoma caninum ANCCAN_05238 I
ANCCEY_07824 Ancylostoma ceylanicum ANCCEY_07824 I
ANCDUO_13439 Ancylostoma duodenale ANCDUO_13439 I
ACAC_0000115801 Angiostrongylus cantonensis ACAC_0000115801 I
ACAC_0000355601 Angiostrongylus cantonensis ACAC_0000355601 I
ASIM_0001022201 Anisakis simplex ASIM_0001022201 I
SPDEF Anolis carolinensis ENSACAG00000015770 I
AALB004027 Anopheles albimanus AALB004027 I
AARA006222 Anopheles arabiensis AARA006222 I
AATE008235 Anopheles atroparvus AATE008235 I
ACOM037974 Anopheles coluzzii ACOM037974 I
ACUA005433 Anopheles culicifacies ACUA005433 I
ADIR002130 Anopheles dirus ADIR002130 I
AEPI002241 Anopheles epiroticus AEPI002241 I
AFAF002698 Anopheles farauti AFAF002698 I
AFUN007103 Anopheles funestus AFUN007103 I
AGAP011341 Anopheles gambiae AGAP011341 I
AMAM008021 Anopheles maculatus AMAM008021 I
AMEC015581 Anopheles melas AMEC015581 I
AMEM008533 Anopheles merus AMEM008533 I
AMIN004239 Anopheles minimus AMIN004239 I
AQUA002229 Anopheles quadriannulatus AQUA002229 I
ASIS007112 Anopheles sinensis ASIS007112 I
ASTEI04247 Anopheles stephensi ASTEI04247 I
GB50829 Apis mellifera GB50829 I
Afo_R002084 Aptenodytes forsteri Afo_R002084 I
ASU_11081 Ascaris suum ASU_11081 I
ENSAMXG00000016751 Astyanax mexicanus ENSAMXG00000016751 I
ACEP13202 Atta cephalotes ACEP13202 I
BGLB000499 Biomphalaria glabrata BGLB000499 I
BGIBMGA001296 Bombyx mori BGIBMGA001296 I
ENSP00000363149-D1 Bos grunniens ENSP00000363149-D1 I
SPDEF Bos taurus ENSBTAG00000021993 I
e_gw.6.372.1 Branchiostoma floridae e_gw.6.372.1 I
fgenesh2_pg.scaffold_113000046 Branchiostoma floridae fgenesh2_pg.scaffold_113000046 I
fgenesh2_pg.scaffold_297000075 Branchiostoma floridae fgenesh2_pg.scaffold_297000075 I
Bm3502 Brugia malayi Bm3502 I
BTMF_0001332301 Brugia timori BTMF_0001332301 I
Brh_R004752 Buceros rhinoceros Brh_R004752 I
BXY_0473000 Bursaphelenchus xylophilus BXY_0473000 I
CBN23969 Caenorhabditis brenneri CBN23969 I
CBG10834 Caenorhabditis briggsae CBG10834 I
ets-4 Caenorhabditis elegans WBGene00017687 I
CRE00614 Caenorhabditis remanei CRE00614 I
SPDEF Callithrix jacchus ENSCJAG00000015294 I
Aan_R003780 Calypte anna Aan_R003780 I
Cflo_02996--XP_396511.3_APIME Camponotus floridanus Cflo_02996--XP_396511.3_APIME I
SPDEF Canis familiaris ENSCAFG00000001227 I
CapteG171657 Capitella teleta CapteG171657 I
SPDEF Cavia porcellus ENSCPOG00000020697 I
Cmyd_10011181 Chelonia mydas Cmyd_10011181 I
ENSCSAG00000009798 Chlorocebus sabaeus ENSCSAG00000009798 I
CLEC002637 Cimex lectularius CLEC002637 I
ENSCING00000003158 Ciona intestinalis ENSCING00000003158 I
CGI_10015191 Crassostrea gigas CGI_10015191 I
CGI_10015192 Crassostrea gigas CGI_10015192 I
CGI_10025035 Crassostrea gigas CGI_10025035 I
CGOC_0000920101 Cylicostephanus goldi CGOC_0000920101 I
KGM_21536 Danaus plexippus KGM_21536 I
DAPPUDRAFT_8447 Daphnia pulex DAPPUDRAFT_8447 I
YQE_03066 Dendroctonus ponderosae YQE_03066 I
DICVIV_08502 Dictyocaulus viviparus DICVIV_08502 I
Spdef Dipodomys ordii ENSDORG00000016134 I
nDi.2.2.2.g02599 Dirofilaria immitis nDi.2.2.2.g02599 I
DME_0000328201 Dracunculus medinensis DME_0000328201 I
GF16302 Drosophila ananassae FBgn0093324 I
GG11574 Drosophila erecta FBgn0103871 I
GH16564 Drosophila grimshawi FBgn0124035 I
Ets98B Drosophila melanogaster FBgn0005659 D
GI22028 Drosophila mojavensis FBgn0144757 I
GL13714 Drosophila persimilis FBgn0151319 I
GA27000 Drosophila pseudoobscura FBgn0248371 I
GM16357 Drosophila sechellia FBgn0171272 I
GD21351 Drosophila simulans FBgn0192788 I
GJ10475 Drosophila virilis FBgn0197755 I
GK11770 Drosophila willistoni FBgn0213781 I
GE23760 Drosophila yakuba FBgn0240917 I
ECANG7_01477 Echinococcus canadensis ECANG7_01477 I
EmuJ_000770200 Echinococcus multilocularis EmuJ_000770200 I
SPDEF Echinops telfairi ENSETEG00000005883 I
EEL_0000969001 Elaeophora elaphi EEL_0000969001 I
EVEC_0001170101 Enterobius vermicularis EVEC_0001170101 I
SPDEF Equus caballus ENSECAG00000021717 I
D915_04898 Fasciola hepatica D915_04898 I
SPDEF Felis catus ENSFCAG00000015357 I
ENSFALG00000003770 Ficedula albicollis ENSFALG00000003770 I
ENSGMOG00000000105 Gadus morhua ENSGMOG00000000105 I
SPDEF Gallus gallus ENSGALG00000002792 I
ENSGACG00000004912 Gasterosteus aculeatus ENSGACG00000004912 I
GPLIN_001015900 Globodera pallida GPLIN_001015900 I
GPUH_0000363301 Gongylonema pulchrum GPUH_0000363301 I
SPDEF Gorilla gorilla ENSGGOG00000000383 I
HCOI00762500 Haemonchus contortus HCOI00762500 I
HCOI01123400 Haemonchus contortus HCOI01123400 I
Hsal_06802--XP_396511.3_APIME Harpegnathos saltator Hsal_06802--XP_396511.3_APIME I
HelroG127646 Helobdella robusta HelroG127646 I
SPDEF Homo sapiens ENSG00000124664 D
TTAC_0000221001 Hydatigera taeniaeformis TTAC_0000221001 I
HDID_0000070401 Hymenolepis diminuta HDID_0000070401 I
ENSSTOG00000028807 Ictidomys tridecemlineatus ENSSTOG00000028807 I
ISCW005284 Ixodes scapularis ISCW005284 I
ENSLACG00000017022 Latimeria chalumnae ENSLACG00000017022 I
ENSLOCG00000009979 Lepisosteus oculatus ENSLOCG00000009979 I
nLs.2.1.2.g03354 Litomosoides sigmodontis nLs.2.1.2.g03354 I
LOAG_10256 Loa loa LOAG_10256 N
LOAG_13336 Loa loa LOAG_13336 I
LotgiG115677 Lottia gigantea LotgiG115677 I
LotgiG140186 Lottia gigantea LotgiG140186 I
SPDEF Loxodonta africana ENSLAFG00000002253 I
LCUP001713 Lucilia cuprina LCUP001713 I
LLOJ008642 Lutzomyia longipalpis LLOJ008642 I
ENSP00000363149 Macaca fascicularis ENSP00000363149 I
ENSMMUG00000007812 Macaca mulatta ENSMMUG00000007812 I
MCINX010888 Melitaea cinxia MCINX010888 I
augustus_masked-nMf.1.1.scaf13560-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf13560-processed-gene-0.0 I
genemark-nMf.1.1.scaf01112-processed-gene-0.4 Meloidogyne floridensis genemark-nMf.1.1.scaf01112-processed-gene-0.4 I
snap_masked-nMf.1.1.scaf13168-processed-gene-0.3 Meloidogyne floridensis snap_masked-nMf.1.1.scaf13168-processed-gene-0.3 I
MhA1_Contig367.frz3.gene4 Meloidogyne hapla MhA1_Contig367.frz3.gene4 I
Minc12522 Meloidogyne incognita Minc12522 I
Minc14198 Meloidogyne incognita Minc14198 I
Minc17377 Meloidogyne incognita Minc17377 I
SPDEF Microcebus murinus ENSMICG00000013437 I
SPDEF Monodelphis domestica ENSMODG00000013916 I
MDOA013732 Musca domestica MDOA013732 I
ENSMPUG00000003167 Mustela putorius furo ENSMPUG00000003167 I
Spdef Mus musculus ENSMUSG00000024215 D
Myotis_brandtii_SPDEF_10017789 Myotis brandtii Myotis_brandtii_SPDEF_10017789 I
SPDEF Myotis lucifugus ENSMLUG00000025914 I
NV12052 Nasonia vitripennis NV12052 I
NECAME_17353 Necator americanus NECAME_17353 I
ENSNLEG00000008374 Nomascus leucogenys ENSNLEG00000008374 I
SPDEF Ochotona princeps ENSOPRG00000009328 I
Ocbimv22034220m.g Octopus bimaculoides Ocbimv22034220m.g I
OESDEN_05539 Oesophagostomum dentatum OESDEN_05539 I
SNAPOd2T00009984001 Oikopleura dioica SNAPOd2T00009984001 I
OFLC_0001252601 Onchocerca flexuosa OFLC_0001252601 I
nOo.2.0.1.g02415 Onchocerca ochengi nOo.2.0.1.g02415 I
WBGene00242060 Onchocerca volvulus WBGene00242060 I
Ogr09009 Ophisaurus gracilis Ogr09009 I
ENSONIG00000014752 Oreochromis niloticus ENSONIG00000014752 I
SPDEF Ornithorhynchus anatinus ENSOANG00000008044 I
SPDEF Oryctolagus cuniculus ENSOCUG00000009812 I
SPDEF Otolemur garnettii ENSOGAG00000011260 I
ENSOARG00000010751 Ovis aries ENSOARG00000010751 I
SPDEF Pan troglodytes ENSPTRG00000018065 I
ENSPANG00000016482 Papio anubis ENSPANG00000016482 I
PEQ_0000187701 Parascaris equorum PEQ_0000187701 I
PTRK_0001608800 Parastrongyloides trichosuri PTRK_0001608800 I
PHUM503640 Pediculus humanus PHUM503640 I
ENSPSIG00000004860 Pelodiscus sinensis ENSPSIG00000004860 I
PPAI004682 Phlebotomus papatasi PPAI004682 I
ENSPFOG00000015137 Poecilia formosa ENSPFOG00000015137 I
Pvit_06029 Pogona vitticeps Pvit_06029 I
ENSPPYG00000016518 Pongo abelii ENSPPYG00000016518 I
Ppa-ets-4 Pristionchus pacificus PPA05668 I
SPDEF Pteropus vampyrus ENSPVAG00000015594 I
Spdef Rattus norvegicus ENSRNOG00000000491 I
RSKR_0000577300 Rhabditophanes kr3021 RSKR_0000577300 I
RPRC004402 Rhodnius prolixus RPRC004402 I
Sakowv30001869m.g Saccoglossus kowalevskii Sakowv30001869m.g I
ENSSHAG00000004899 Sarcophilus harrisii ENSSHAG00000004899 I
SMU15002081 Schmidtea mediterranea SMU15002081 I
SMU15006886 Schmidtea mediterranea SMU15006886 N
SMU15031064 Schmidtea mediterranea SMU15031064 I
ENSSARG00000011301 Sorex araneus ENSSARG00000011301 I
L596_g5779 Steinernema carpocapsae L596_g5779 I
L889_g30192 Steinernema feltiae L889_g30192 I
L893_g26809 Steinernema glaseri L893_g26809 I
L898_g2231 Steinernema monticolum L898_g2231 I
L892_g3915 Steinernema scapterisci L892_g3915 I
SMAR015178 Strigamia maritima SMAR015178 I
SPU_008528 Strongylocentrotus purpuratus SPU_008528 I
SPAL_0001077000 Strongyloides papillosus SPAL_0001077000 I
SSTP_0001090100 Strongyloides stercoralis SSTP_0001090100 I
SVE_1980500 Strongyloides venezuelensis SVE_1980500 I
SVUK_0000082401 Strongylus vulgaris SVUK_0000082401 I
ENSSSCG00000024531 Sus scrofa ENSSSCG00000024531 I
TsM_000593600 Taenia solium TsM_000593600 I
SPDEF Taeniopygia guttata ENSTGUG00000001781 I
SPDEF Takifugu rubripes ENSTRUG00000001430 I
SPDEF Takifugu rubripes ENSTRUG00000011048 I
tetur10g01220 Tetranychus urticae tetur10g01220 I
SPDEF Tetraodon nigroviridis ENSTNIG00000001703 I
SPDEF Tetraodon nigroviridis ENSTNIG00000018309 I
TCLT_0000444401 Thelazia callipaeda TCLT_0000444401 I
TCNE_0000935601 Toxocara canis TCNE_0000935601 I
TC008243 Tribolium castaneum TC008243 I
SPDEF Tursiops truncatus ENSTTRG00000007816 I
ENSVPAG00000011404 Vicugna pacos ENSVPAG00000011404 I
WUBG_02585 Wuchereria bancrofti WUBG_02585 I
spdef Xenopus tropicalis XB-GENE-491205 I
elf5l Xenopus tropicalis XB-GENE-919648 I