L798_15745 (Zootermopsis nevadensis)
Paired box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00292 (PAX) IPR001523 L798_15745 T311958_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Poxn
M03946_2.00 		Drosophila melanogaster
DGCGTGACSGTCACGSY
RSCGTGACSGTCACGCH		 SELEX
Nitta et al.(2015)
Poxn_1 		0.822 0.822
Poxn
M03947_2.00 		Drosophila melanogaster
RSCGKGACSGTTMCGSW
WSCGKAACSGTCMCGSY		 SELEX
Nitta et al.(2015)
Poxn_2 		0.822 0.822
Poxn
M03948_2.00 		Drosophila melanogaster
NCGTTCCGGAACGD
HCGTTCCGGAACGN		 SELEX
Nitta et al.(2015)
Poxn_3 		0.822 0.822
Poxn
M06437_2.00 		Drosophila melanogaster
RSCGTGACG
CGTCACGSY		 B1H
Zhu et al.(2011)
Poxn_SOLEXA_5_FBgn0003130 		0.822 0.822
pax2b
M02425_2.00 		Danio rerio
HVNYSRNSCR
YGSNYSRNBD		 PBM
Weirauch et al.(2014)
pTH8679 		0.700 0.700
Pax5B
M01301_2.00 		Gallus gallus
NSNDTNNNN
NNNNAHNSN		 PBM
Lambert et al.(2019)
pTH9781 		0.700 0.700
pax2
M02428_2.00 		Xenopus tropicalis
NNNRNBCRNN
NNYGVNYNNN		 PBM
Weirauch et al.(2014)
pTH8556 		0.700 0.700
PAX5
M03443_2.00 		Homo sapiens
RNBYANYSAWSCGTRACN
NGTYACGSWTSRNTRVNY		 SELEX
Jolma et al.(2013)
PAX5_1 		0.700 0.700
PAX5
M08160_2.00 		Homo sapiens
RDGCGTGACCNN
NNGGTCACGCHY		 ChIP-seq
Mathelier et al.(2014)
MA0014.3 		0.700 0.700
PAX5
M07995_2.00 		Homo sapiens
BCAVYSRDSCRKRRC
GYYMYGSHYSRBTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5C20_HudsonAlpha 		0.700 0.700
PAX5
M07996_2.00 		Homo sapiens
BCASYSRDSCRTRAC
GTYAYGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12878_PAX5N19_HudsonAlpha 		0.700 0.700
PAX5
M07997_2.00 		Homo sapiens
CASYSRDSCRKRACN
NGTYMYGSHYSRSTG		 ChIP-seq
Gerstein et al.(2012)
GM12891_PAX5C20_HudsonAlpha 		0.700 0.700
PAX5
M07998_2.00 		Homo sapiens
BCASYSRDSCGKRRC
GYYMCGSHYSRSTGV		 ChIP-seq
Gerstein et al.(2012)
GM12892_PAX5C20_HudsonAlpha 		0.700 0.700
PAX5
M08227_2.00 		Homo sapiens
BCANYSRDGCGTRAM
KTYACGCHYSRNTGV		 ChIP-seq
Contrino et al.(2012)
Mv108 		0.700 0.700
PAX5
M08228_2.00 		Homo sapiens
AGCGTGRCYG
CRGYCACGCT		 ChIP-seq
Contrino et al.(2012)
Mv109 		0.700 0.700
PAX5
M09341_2.00 		Homo sapiens
SNVDGNKCARCVRAGCRDGAC
GTCHYGCTYBGYTGMNCHBNS		 Misc
Kulakovskiy et al.(2013)
PAX5_HUMAN.H11MO.0.A 		0.700 0.700
Pax5
M09342_2.00 		Mus musculus
VDRNBCAVYVRDSCRKRRM
KYYMYGSHYBRBTGVNYHB		 Misc
Kulakovskiy et al.(2013)
PAX5_MOUSE.H11MO.0.A 		0.700 0.700
PAX5
M09622_2.00 		Homo sapiens
BCASYSRDSCRTGRMN
NKYCAYGSHYSRSTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_1 		0.700 0.700
PAX5
M09623_2.00 		Homo sapiens
BCABNVRSCGTGAC
GTCACGSYBNVTGV		 Misc
Heinz et al.(2010)
GM12878-PAX5_GSE32465_2 		0.700 0.700
PAX5
M11208_2.00 		Homo sapiens
BCNNNRNKCANBGNWGNRKRGMSRSHNB
VNDSYSKCYMYNCWNCVNTGMNYNNNGV		 Transfac
Matys et al.(2006)
V$PAX5_01 		0.700 0.700
PAX5
M11209_2.00 		Homo sapiens
VRHVDGDNDBBTNRAGCGKRACVRYNVH
DBNRYBGTYMCGCTYNAVVHNHCHBDYB		 Transfac
Matys et al.(2006)
V$PAX5_02 		0.700 0.700
PAX5
M11210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_06 		0.700 0.700
PAX5
M11211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_07 		0.700 0.700
PAX5
M11212_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$PAX5_Q6 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KDR23176 Paired box 389 478

Links

Other Paired box family TFs
Other Zootermopsis nevadensis TFs

113 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004678.1 Alligator sinensis Alligator_sinensis_CCG004678.1 N
Alligator_sinensis_CCG000180.1 Alligator sinensis Alligator_sinensis_CCG000180.1 N
Afo_R008528 Aptenodytes forsteri Afo_R008528 N
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N
Cmyd_10017930 Chelonia mydas Cmyd_10017930 N
CLEC001936 Cimex lectularius CLEC001936 N
ENSCSAVG00000011823 Ciona savignyi ENSCSAVG00000011823 N
cers4b Danio rerio ENSDARG00000018619 N
cers3b Danio rerio ENSDARG00000036337 N
YQE_11876 Dendroctonus ponderosae YQE_11876 N
ENSGMOG00000018099 Gadus morhua ENSGMOG00000018099 N
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N
LotgiG226091 Lottia gigantea LotgiG226091 N
ENSMGAG00000017003 Meleagris gallopavo ENSMGAG00000017003 N
MCINX005367 Melitaea cinxia MCINX005367 N
ENSMICG00000017321 Microcebus murinus ENSMICG00000017321 N
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N
Myotis_brandtii_Lass6_10034918 Myotis brandtii Myotis_brandtii_Lass6_10034918 N
Ocbimv22016239m.g Octopus bimaculoides Ocbimv22016239m.g N
ENSONIG00000019701 Oreochromis niloticus ENSONIG00000019701 N
ENSONIG00000017329 Oreochromis niloticus ENSONIG00000017329 N
CERS5 Oryzias latipes ENSORLG00000010219 N
ENSOARG00000017904 Ovis aries ENSOARG00000017904 N
ENSPMAG00000008848 Petromyzon marinus ENSPMAG00000008848 N
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N
ENSSHAG00000001747 Sarcophilus harrisii ENSSHAG00000001747 N
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N
SCUD_0001662501 Schistosoma curassoni SCUD_0001662501 N
Smp_042440 Schistosoma mansoni Smp_042440 N
SROB_0002172301 Schistosoma rodhaini SROB_0002172301 N
SINV24013 Solenopsis invicta SINV24013 N
cers2a Takifugu rubripes ENSTRUG00000012292 N
CERS5 Takifugu rubripes ENSTRUG00000010435 N
cers4b Takifugu rubripes ENSTRUG00000000191 N
CERS5 Tetraodon nigroviridis ENSTNIG00000017897 N
cers2a Tetraodon nigroviridis ENSTNIG00000017545 N
AAL89720 Xenopus laevis AAL89720 N
cers3.L Xenopus laevis XB-GENE-6251639 N
cers5.S Xenopus laevis XB-GENE-866438 N
ENSXMAG00000010322 Xiphophorus maculatus ENSXMAG00000010322 N
L798_00373 Zootermopsis nevadensis L798_00373 N