ENSPMAG00000003112 (Petromyzon marinus)
Pipsqueak

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF05225 (HTH_psq) IPR007889 ENSPMAG00000003112 T313606_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ENSMGAG00000009953
M02433_2.00 		Meleagris gallopavo
NNNYNAAWNN
NNWTTNRNNN		 PBM
Weirauch et al.(2014)
pTH8649 		0.841 0.841
ENSORLG00000000044
M02434_2.00 		Oryzias latipes
CCCAAAWT
AWTTTGGG		 PBM
Weirauch et al.(2014)
pTH9275 		0.818 0.818
ENSACAG00000012432
M02430_2.00 		Anolis carolinensis
NNNCNAAWNN
NNWTTNGNNN		 PBM
Weirauch et al.(2014)
pTH9220 		0.795 0.795
LCORL
M02431_2.00 		Choloepus hoffmanni
NNYNAAHNN
NNDTTNRNN		 PBM
Weirauch et al.(2014)
pTH9253 		0.795 0.795
lcorl
M02438_2.00 		Xenopus tropicalis
NYCNAAWHN
NDWTTNGRN		 PBM
Weirauch et al.(2014)
pTH8558 		0.795 0.795
For this family, TFs with SR scores > 0.778 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPMAP00000003389 Pipsqueak 525 569

Links

Other Pipsqueak family TFs
Other Petromyzon marinus TFs

60 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000000186 Ailuropoda melanoleuca ENSAMEG00000000186 I 0.822
Alligator_sinensis_CCG020164.1 Alligator sinensis Alligator_sinensis_CCG020164.1 I 0.822
ENSAPLG00000003032 Anas platyrhynchos ENSAPLG00000003032 I 0.822
Afo_R002709 Aptenodytes forsteri Afo_R002709 I 0.822
ENSBTAP00000005261-D1 Bos grunniens ENSBTAP00000005261-D1 I 0.822
ENSBTAG00000004029 Bos taurus ENSBTAG00000004029 I 0.822
Brh_R001506 Buceros rhinoceros Brh_R001506 I 0.822
ENSCJAG00000016484 Callithrix jacchus ENSCJAG00000016484 I 0.822
Aan_R012556 Calypte anna Aan_R012556 I 0.822
ENSCAFG00000008905 Canis familiaris ENSCAFG00000008905 I 0.822
ENSCPOG00000005739 Cavia porcellus ENSCPOG00000005739 I 0.822
Cmyd_10003742 Chelonia mydas Cmyd_10003742 I 0.822
ENSCSAG00000006043 Chlorocebus sabaeus ENSCSAG00000006043 I 0.822
ENSCHOG00000001981 Choloepus hoffmanni ENSCHOG00000001981 I 0.822
lcor Danio rerio ENSDARG00000100908 I 0.800
ENSETEG00000015066 Echinops telfairi ENSETEG00000015066 I 0.822
ENSECAG00000013517 Equus caballus ENSECAG00000013517 I 0.822
ENSFCAG00000028121 Felis catus ENSFCAG00000028121 I 0.822
ENSFALG00000008484 Ficedula albicollis ENSFALG00000008484 I 0.822
ENSGALG00000023649 Gallus gallus ENSGALG00000023649 I 0.822
Gfo_R002325 Geospiza fortis Gfo_R002325 I 0.822
ENSGGOG00000026110 Gorilla gorilla ENSGGOG00000026110 I 0.822
LCOR Homo sapiens ENSG00000196233 I 0.822
ENSSTOG00000010808 Ictidomys tridecemlineatus ENSSTOG00000010808 I 0.822
ENSLACG00000001265 Latimeria chalumnae ENSLACG00000001265 I 0.800
ENSLOCG00000012823 Lepisosteus oculatus ENSLOCG00000012823 I 0.822
ENSLAFG00000014271 Loxodonta africana ENSLAFG00000014271 I 0.822
ENSP00000360138 Macaca fascicularis ENSP00000360138 I 0.822
ENSMMUG00000010425 Macaca mulatta ENSMMUG00000010425 I 0.822
ENSMGAG00000009953 Meleagris gallopavo ENSMGAG00000009953 D 0.822
ENSMICG00000007572 Microcebus murinus ENSMICG00000007572 I 0.822
ENSMODG00000004531 Monodelphis domestica ENSMODG00000004531 I 0.822
Lcor Mus musculus ENSMUSG00000025019 I 0.822
Myotis_brandtii_LCOR_10025723 Myotis brandtii Myotis_brandtii_LCOR_10025723 I 0.822
ENSMLUG00000000494 Myotis lucifugus ENSMLUG00000000494 I 0.822
ENSNLEG00000013648 Nomascus leucogenys ENSNLEG00000013648 I 0.822
ENSOPRG00000014745 Ochotona princeps ENSOPRG00000014745 I 0.822
Ogr16502 Ophisaurus gracilis Ogr16502 I 0.822
ENSONIG00000000255 Oreochromis niloticus ENSONIG00000000255 I 0.800
ENSORLG00000000044 Oryzias latipes ENSORLG00000000044 D 0.800
ENSOGAG00000008137 Otolemur garnettii ENSOGAG00000008137 I 0.822
ENSOARG00000008725 Ovis aries ENSOARG00000008725 I 0.822
LCOR Pan troglodytes ENSPTRG00000002800 I 0.822
ENSPSIG00000009179 Pelodiscus sinensis ENSPSIG00000009179 I 0.822
ENSPFOG00000009902 Poecilia formosa ENSPFOG00000009902 I 0.800
Pvit_17823 Pogona vitticeps Pvit_17823 I 0.822
ENSPCAG00000007084 Procavia capensis ENSPCAG00000007084 I 0.822
ENSPVAG00000003364 Pteropus vampyrus ENSPVAG00000003364 I 0.822
Lcor Rattus norvegicus ENSRNOG00000042679 I 0.822
ENSSHAG00000018667 Sarcophilus harrisii ENSSHAG00000018667 I 0.822
ENSSARG00000008230 Sorex araneus ENSSARG00000008230 I 0.822
ENSSSCG00000010511 Sus scrofa ENSSSCG00000010511 I 0.822
ENSTGUG00000009834 Taeniopygia guttata ENSTGUG00000009834 I 0.822
lcor Takifugu rubripes ENSTRUG00000006194 I 0.800
lcor Tetraodon nigroviridis ENSTNIG00000003614 I 0.800
ENSTBEG00000005837 Tupaia belangeri ENSTBEG00000005837 I 0.822
ENSTTRG00000009856 Tursiops truncatus ENSTTRG00000009856 I 0.822
Tal_R010723 Tyto alba Tal_R010723 I 0.822
ENSVPAG00000007583 Vicugna pacos ENSVPAG00000007583 I 0.822
ENSXMAG00000005637 Xiphophorus maculatus ENSXMAG00000005637 I 0.800