CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
L898_g31322
(
Steinernema monticolum
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
L898_g31322
T315067_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L898_g31322.t1
Pipsqueak
262
306
SQDDLEKAVLDIRSGRLGTRRASVVYGIPRSTLRNKIYKLEAAAE
L898_g31322.t1
Pipsqueak
421
465
KSKLEEAVQTVRRGEMSVHKAGSLFGVPHSTLEYKVKERNLMRNR
Links
Other
Pipsqueak
family TFs
Other
Steinernema monticolum
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAN0_014d4902
Pseudozyma antarctica
PAN0_014d4902
N
PSEUBRA_SCAF15g05674
Pseudozyma brasiliensis
PSEUBRA_SCAF15g05674
N
PFL1_04486
Pseudozyma flocculosa
PFL1_04486
N
PHSY_005955
Pseudozyma hubeiensis
PHSY_005955
N
UHOR_07628
Ustilago hordei
UHOR_07628
N
UM04774
Ustilago maydis
UM04774
N