CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PSEUBRA_SCAF15g05674
(
Pseudozyma brasiliensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
PSEUBRA_SCAF15g05674
T127188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EST08642
C2H2 ZF
552
577
KCPYPNCNKTFAKNRSYNLKAHLRSH
EST08642
C2H2 ZF
583
605
FACAVCPRAFSRKHDLERHSRVH
EST08642
C2H2 ZF
611
632
YVCEICGKGFPRSDALRRHWRV
Links
Other
C2H2 ZF
family TFs
Other
Pseudozyma brasiliensis
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PAN0_014d4902
Pseudozyma antarctica
PAN0_014d4902
N
0.827
PHSY_005955
Pseudozyma hubeiensis
PHSY_005955
N
0.824
sr15647
Sporisorium reilianum
sr15647
N
0.824
UHOR_07628
Ustilago hordei
UHOR_07628
N
0.824
UM04774
Ustilago maydis
UM04774
N
0.824
PFL1_04486
Pseudozyma flocculosa
PFL1_04486
N
0.795