CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA12444
(
Caenorhabditis japonica
)
Prospero
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF05044 (HPD)
IPR007738
CJA12444
T316414_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pros-1
M00708_2.00
Caenorhabditis elegans
NNBRAGRHDN
NHDYCTYVNN
PBM
Narasimhan et al.(2015)
pTH9164
0.896
0.896
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA12444
Prospero
348
501
MLTPMHLRKAKLMFFYTRYPNSNLLKSYFPDIRFNKNNTAQLVKWFSNFREFYYIQMEKFGRQLLAEGVRDRSEIFVTKDSELFKVLNTHYNRNNHIKAPDHLVLVVQETLREFYDAIKLGKDVEPSWKKTIYKIINRMDDQIPDFFKEPNFLE
Links
Other
Prospero
family TFs
Other
Caenorhabditis japonica
TFs
64 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART03G10890
Oryza barthii
OBART03G10890
N
0.000
OB03G21040
Oryza brachyantha
OB03G21040
N
0.000
ORGLA03G0104600
Oryza glaberrima
ORGLA03G0104600
N
0.000
BGIOSGA011095
Oryza indica
BGIOSGA011095
N
0.000
OLONG_015766
Oryza longistaminata
OLONG_015766
N
0.000
OMERI03G10160
Oryza meridionalis
OMERI03G10160
N
0.000
OPUNC03G10480
Oryza punctata
OPUNC03G10480
N
0.000
ORUFI03G11130
Oryza rufipogon
ORUFI03G11130
N
0.000