CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACEP24572
(
Atta cephalotes
)
Rel
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00554 (RHD_DNA_bind)
IPR011539
ACEP24572
T316967_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
dl
M02712_2.00
Drosophila melanogaster
SGGGKTTTTYCV
BGRAAAAMCCCS
SELEX
Mathelier et al.(2014)
MA0022.1
0.775
0.775
dl
M02713_2.00
Drosophila melanogaster
GGGGWWTTCC
GGAAWWCCCC
SELEX
Mathelier et al.(2014)
MA0023.1
0.775
0.775
dl
M09691_2.00
Drosophila melanogaster
BRGRWTTYCCM
KGGRAAWYCYV
Misc
Kulakovskiy et al.(2009)
dl
0.775
0.775
dl
M11243_2.00
Drosophila melanogaster
GGGTTTTTCCV
BGGAAAAACCC
Transfac
Matys et al.(2006)
I$DL_01
0.775
0.775
dl
M11244_2.00
Drosophila melanogaster
BRDTTTTCYSD
HSRGAAAAHYV
Transfac
Matys et al.(2006)
I$DL_02
0.775
0.775
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACEP24572-PA
Rel
41
211
VEILEQPASKALRFRYECEGRSAGSIPGVNSTPENKTFPSIRIVGYKGRAMVVVSCVTKDAPYRPHPHNLVGKEVCKQGVCTVEIPSGNMVVTFSNLGIQCVKKKDIEEALRMRQELRVDPFRTGFEHRRHPTNIDLNAVRLCFQVFLEGSQKGKFNKPLAPIVSDPIYDK
Links
Other
Rel
family TFs
Other
Atta cephalotes
TFs
56 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG004973.1
Alligator sinensis
Alligator_sinensis_CCG004973.1
N
ACEP25962
Atta cephalotes
ACEP25962
N
BGIBMGA007758
Bombyx mori
BGIBMGA007758
I
ENSP00000335044-D1
Bos grunniens
ENSP00000335044-D1
N
ARID2
Bos taurus
ENSBTAG00000011087
N
fgenesh2_pg.scaffold_503000011
Branchiostoma floridae
fgenesh2_pg.scaffold_503000011
I
ARID2
Canis familiaris
ENSCAFG00000009335
N
Cmyd_10012613
Chelonia mydas
Cmyd_10012613
N
ENSCSAG00000006749
Chlorocebus sabaeus
ENSCSAG00000006749
N
KGM_16732
Danaus plexippus
KGM_16732
I
ARID2
Dasypus novemcinctus
ENSDNOG00000014939
N
ARID2
Equus caballus
ENSECAG00000019032
N
ARID2
Felis catus
ENSFCAG00000012831
N
Hsal_11764--XP_001120115.1_APIME
Harpegnathos saltator
Hsal_11764--XP_001120115.1_APIME
N
HMEL011744
Heliconius melpomene
HMEL011744
I
ARID2
Homo sapiens
ENSG00000189079
N
ENSLACG00000005013
Latimeria chalumnae
ENSLACG00000005013
N
ARID2
Loxodonta africana
ENSLAFG00000004415
N
ENSMMUP00000020998
Macaca fascicularis
ENSMMUP00000020998
N
ARID2
Macaca mulatta
ENSMMUG00000015962
N
MCINX003210
Melitaea cinxia
MCINX003210
I
ARID2
Microcebus murinus
ENSMICG00000001487
N
ARID2
Monodelphis domestica
ENSMODG00000018527
N
Myotis_brandtii_ARID2_10029493
Myotis brandtii
Myotis_brandtii_ARID2_10029493
N
ARID2
Myotis lucifugus
ENSMLUG00000006908
N
ENSOANG00000010834
Ornithorhynchus anatinus
ENSOANG00000010834
N
ARID2
Oryctolagus cuniculus
ENSOCUG00000013306
N
ARID2
Otolemur garnettii
ENSOGAG00000024418
N
ENSPANG00000015334
Papio anubis
ENSPANG00000015334
N
ARID2
Pteropus vampyrus
ENSPVAG00000009834
N
Sakowv30024145m.g
Saccoglossus kowalevskii
Sakowv30024145m.g
N
ARID2
Sorex araneus
ENSSARG00000007415
N
ENSSSCG00000030685
Sus scrofa
ENSSSCG00000030685
N
Tal_R007164
Tyto alba
Tal_R007164
N
ARID2
Vicugna pacos
ENSVPAG00000004779
N
ENSXMAG00000006636
Xiphophorus maculatus
ENSXMAG00000006636
N