gw.501.1.1 (Branchiostoma floridae)
RFX

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02257 (RFX_DNA_binding) IPR003150 gw.501.1.1 T319046_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Rfx6
M09365_2.00 		Mus musculus
BDGTWKCYNDG
CHNRGMAACHV		 Misc
Kulakovskiy et al.(2013)
RFX6_MOUSE.H11MO.0.C 		0.655 0.938
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.501.1.1 RFX 1 32

Links

Other RFX family TFs
Other Branchiostoma floridae TFs

71 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI32234 Acyrthosiphon pisum ACYPI32234 I
AAEL009442 Aedes aegypti AAEL009442 I
ENSAMEG00000001342 Ailuropoda melanoleuca ENSAMEG00000001342 I
ENSAMEG00000012405 Ailuropoda melanoleuca ENSAMEG00000012405 I
ENSAMEG00000015695 Ailuropoda melanoleuca ENSAMEG00000015695 I
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I
Alligator_sinensis_CCG000894.1 Alligator sinensis Alligator_sinensis_CCG000894.1 I
Alligator_sinensis_CCG002912.1 Alligator sinensis Alligator_sinensis_CCG002912.1 I
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I
ENSAPLG00000012304 Anas platyrhynchos ENSAPLG00000012304 I
ATF3 Anolis carolinensis ENSACAG00000006353 I
FOSL2 Anolis carolinensis ENSACAG00000009506 I
FOS Anolis carolinensis ENSACAG00000016921 I
JDP2 Anolis carolinensis ENSACAG00000016944 I
AALB009141 Anopheles albimanus AALB009141 I
AARA001983 Anopheles arabiensis AARA001983 I
AATE020966 Anopheles atroparvus AATE020966 I
ACUA018111 Anopheles culicifacies ACUA018111 I
ADIR009888 Anopheles dirus ADIR009888 I
AEPI006169 Anopheles epiroticus AEPI006169 I
AFAF020202 Anopheles farauti AFAF020202 I
AFUN001209 Anopheles funestus AFUN001209 I
AMEC005345 Anopheles melas AMEC005345 I
AMEM000126 Anopheles merus AMEM000126 I
AMIN002428 Anopheles minimus AMIN002428 I
ASIS002535 Anopheles sinensis ASIS002535 I
ASTEI05449 Anopheles stephensi ASTEI05449 I
GB53401 Apis mellifera GB53401 I
Afo_R004508 Aptenodytes forsteri Afo_R004508 I
Afo_R004731 Aptenodytes forsteri Afo_R004731 I
ENSAMXG00000010494 Astyanax mexicanus ENSAMXG00000010494 I
ENSAMXG00000013765 Astyanax mexicanus ENSAMXG00000013765 I
ENSAMXG00000013783 Astyanax mexicanus ENSAMXG00000013783 I
ENSAMXG00000013804 Astyanax mexicanus ENSAMXG00000013804 I
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I
ENSAMXG00000018054 Astyanax mexicanus ENSAMXG00000018054 I
ENSBTAP00000010762-D1 Bos grunniens ENSBTAP00000010762-D1 I
ENSBTAP00000011265-D1 Bos grunniens ENSBTAP00000011265-D1 I
ENSBTAP00000032838-D1 Bos grunniens ENSBTAP00000032838-D1 I
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I
FOSB Bos taurus ENSBTAG00000008182 I
ATF3 Bos taurus ENSBTAG00000008545 I
JDP2 Bos taurus ENSBTAG00000009451 I
FOSL2 Bos taurus ENSBTAG00000023929 I
Brh_R009866 Buceros rhinoceros Brh_R009866 I
FOSL2 Callithrix jacchus ENSCJAG00000009019 I
FOSB Callithrix jacchus ENSCJAG00000012636 I
ATF3 Callithrix jacchus ENSCJAG00000015735 I
JDP2 Callithrix jacchus ENSCJAG00000020645 I
Aan_R000237 Calypte anna Aan_R000237 I
Aan_R005677 Calypte anna Aan_R005677 I
Aan_R011482 Calypte anna Aan_R011482 I
FOSB Canis familiaris ENSCAFG00000004443 I
FOSL2 Canis familiaris ENSCAFG00000005212 I
ATF3 Canis familiaris ENSCAFG00000012339 I
JDP2 Canis familiaris ENSCAFG00000017042 I
ENSCPOG00000003247 Cavia porcellus ENSCPOG00000003247 I
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I
FOSB Cavia porcellus ENSCPOG00000015608 I
ENSCPOG00000019424 Cavia porcellus ENSCPOG00000019424 I
Cmyd_10014529 Chelonia mydas Cmyd_10014529 I
Cmyd_10020806 Chelonia mydas Cmyd_10020806 I
ENSCSAG00000010278 Chlorocebus sabaeus ENSCSAG00000010278 I
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I
ENSCSAG00000015405 Chlorocebus sabaeus ENSCSAG00000015405 I
ATF3 Choloepus hoffmanni ENSCHOG00000010259 I
CLEC002857 Cimex lectularius CLEC002857 I
CGI_10026193 Crassostrea gigas CGI_10026193 I
CpipJ_CPIJ001204 Culex pipiens CpipJ_CPIJ001204 I
CPIJ001204 Culex quinquefasciatus CPIJ001204 I
KGM_03513 Danaus plexippus KGM_03513 I
atf3 Danio rerio ENSDARG00000007823 I
jdp2b Danio rerio ENSDARG00000020133 I
jdp2a Danio rerio ENSDARG00000040137 I
fosl2 Danio rerio ENSDARG00000040623 I
fosb Danio rerio ENSDARG00000055751 I
FOSB Dasypus novemcinctus ENSDNOG00000008748 I
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I
ENSDNOG00000044236 Dasypus novemcinctus ENSDNOG00000044236 I
YQE_04190 Dendroctonus ponderosae YQE_04190 I
ENSDORG00000003738 Dipodomys ordii ENSDORG00000003738 I
ENSDORG00000006025 Dipodomys ordii ENSDORG00000006025 I
Fosb Dipodomys ordii ENSDORG00000008112 I
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I
GG12710 Drosophila erecta FBgn0104997 I
GH24925 Drosophila grimshawi FBgn0132380 I
Atf3 Drosophila melanogaster FBgn0028550 D
GI21781 Drosophila mojavensis FBgn0144511 I
GL14394 Drosophila persimilis FBgn0151999 I
GA10981 Drosophila pseudoobscura FBgn0071037 I
GM18988 Drosophila sechellia FBgn0173891 I
GD16430 Drosophila simulans FBgn0188046 I
GJ16954 Drosophila virilis FBgn0204132 I
GK19912 Drosophila willistoni FBgn0221909 I
GE16537 Drosophila yakuba FBgn0234052 I
FOSL2 Echinops telfairi ENSETEG00000011721 I
ATF3 Echinops telfairi ENSETEG00000015701 I
ATF3 Equus caballus ENSECAG00000011486 I
JDP2 Equus caballus ENSECAG00000014862 I
FOSL2 Equus caballus ENSECAG00000017657 I
FOSB Equus caballus ENSECAG00000018002 I
FOSL2 Erinaceus europaeus ENSEEUG00000007937 I
ATF3 Erinaceus europaeus ENSEEUG00000010993 I
FOSL2 Felis catus ENSFCAG00000029462 I
JDP2 Felis catus ENSFCAG00000029464 I
ATF3 Felis catus ENSFCAG00000029636 I
FOSB Felis catus ENSFCAG00000030571 I
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I
ENSFALG00000012408 Ficedula albicollis ENSFALG00000012408 I
ENSGMOG00000002017 Gadus morhua ENSGMOG00000002017 I
ENSGMOG00000011052 Gadus morhua ENSGMOG00000011052 I
ENSGMOG00000011063 Gadus morhua ENSGMOG00000011063 I
ENSGMOG00000015382 Gadus morhua ENSGMOG00000015382 I
ENSGMOG00000016268 Gadus morhua ENSGMOG00000016268 I
JDP2 Gallus gallus ENSGALG00000010322 I
ATF3 Gallus gallus ENSGALG00000025887 I
jdp2a Gasterosteus aculeatus ENSGACG00000007611 I
fosb Gasterosteus aculeatus ENSGACG00000009792 I
si:ch211-153j24.3 Gasterosteus aculeatus ENSGACG00000010481 I
jdp2b Gasterosteus aculeatus ENSGACG00000010513 I
atf3 Gasterosteus aculeatus ENSGACG00000011997 I
fosl2 Gasterosteus aculeatus ENSGACG00000012956 I
fosl1a Gasterosteus aculeatus ENSGACG00000017059 I
Gfo_R010939 Geospiza fortis Gfo_R010939 I
Gfo_R012906 Geospiza fortis Gfo_R012906 I
FOSL2 Gorilla gorilla ENSGGOG00000009435 I
JDP2 Gorilla gorilla ENSGGOG00000010752 I
FOSB Gorilla gorilla ENSGGOG00000010952 I
ATF3 Gorilla gorilla ENSGGOG00000014206 I
HHAL001739-PA Halyomorpha halys HHAL001739-PA I
Hsal_14793--XP_392513.1_APIME Harpegnathos saltator Hsal_14793--XP_392513.1_APIME I
HMEL006570 Heliconius melpomene HMEL006570 I
FOSL2 Homo sapiens ENSG00000075426 D
FOSB Homo sapiens ENSG00000125740 D
JDP2 Homo sapiens ENSG00000140044 D
ATF3 Homo sapiens ENSG00000162772 D
ENSSTOG00000007121 Ictidomys tridecemlineatus ENSSTOG00000007121 I
ENSSTOG00000022839 Ictidomys tridecemlineatus ENSSTOG00000022839 I
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I
ENSSTOG00000028949 Ictidomys tridecemlineatus ENSSTOG00000028949 I
ENSLACG00000001315 Latimeria chalumnae ENSLACG00000001315 I
ENSLACG00000007288 Latimeria chalumnae ENSLACG00000007288 I
ENSLACG00000013070 Latimeria chalumnae ENSLACG00000013070 I
ENSLACG00000013874 Latimeria chalumnae ENSLACG00000013874 I
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I
ENSLOCG00000000814 Lepisosteus oculatus ENSLOCG00000000814 I
ENSLOCG00000010507 Lepisosteus oculatus ENSLOCG00000010507 I
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I
ENSLOCG00000014630 Lepisosteus oculatus ENSLOCG00000014630 I
ENSLOCG00000017169 Lepisosteus oculatus ENSLOCG00000017169 I
LDEC018714 Leptinotarsa decemlineata LDEC018714 I
FOSB Loxodonta africana ENSLAFG00000008834 I
FOSL2 Loxodonta africana ENSLAFG00000009035 I
JDP2 Loxodonta africana ENSLAFG00000025757 I
ATF3 Loxodonta africana ENSLAFG00000032487 I
LCUP009590 Lucilia cuprina LCUP009590 I
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I
ENSP00000245919 Macaca fascicularis ENSP00000245919 I
ENSP00000264716 Macaca fascicularis ENSP00000264716 I
ENSP00000355954 Macaca fascicularis ENSP00000355954 I
ATF3 Macaca mulatta ENSMMUG00000012185 I
FOSL2 Macaca mulatta ENSMMUG00000014464 I
ENSMEUG00000007708 Macropus eugenii ENSMEUG00000007708 I
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I
ENSMEUG00000012081 Macropus eugenii ENSMEUG00000012081 I
ATF3 Meleagris gallopavo ENSMGAG00000009708 I
JDP2 Meleagris gallopavo ENSMGAG00000012755 I
MCINX010628 Melitaea cinxia MCINX010628 I
ENSMICG00000001423 Microcebus murinus ENSMICG00000001423 I
FOSB Microcebus murinus ENSMICG00000001809 I
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I
ATF3 Monodelphis domestica ENSMODG00000003042 I
JDP2 Monodelphis domestica ENSMODG00000005909 I
FOSB Monodelphis domestica ENSMODG00000021545 I
MDOA009377 Musca domestica MDOA009377 I
ENSMPUG00000005914 Mustela putorius furo ENSMPUG00000005914 I
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I
ENSMPUG00000015864 Mustela putorius furo ENSMPUG00000015864 I
ENSMPUG00000017989 Mustela putorius furo ENSMPUG00000017989 I
Fosb Mus musculus ENSMUSG00000003545 D
Atf3 Mus musculus ENSMUSG00000026628 D
Fosl2 Mus musculus ENSMUSG00000029135 D
Jdp2 Mus musculus ENSMUSG00000034271 D
Myotis_brandtii_Atf3_10018256 Myotis brandtii Myotis_brandtii_Atf3_10018256 I
Myotis_brandtii_Fosb_10006013 Myotis brandtii Myotis_brandtii_Fosb_10006013 I
Myotis_brandtii_FOSL2_10031162 Myotis brandtii Myotis_brandtii_FOSL2_10031162 I
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I
FOSL2 Myotis lucifugus ENSMLUG00000000200 I
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I
FOSB Myotis lucifugus ENSMLUG00000009003 I
ATF3 Myotis lucifugus ENSMLUG00000015048 I
NV16727 Nasonia vitripennis NV16727 I
NEMVEDRAFT_v1g233229 Nematostella vectensis NEMVEDRAFT_v1g233229 I
ENSNLEG00000002090 Nomascus leucogenys ENSNLEG00000002090 I
ENSNLEG00000002916 Nomascus leucogenys ENSNLEG00000002916 I
ENSNLEG00000015308 Nomascus leucogenys ENSNLEG00000015308 I
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I
FOSL2 Ochotona princeps ENSOPRG00000011952 I
JDP2 Ochotona princeps ENSOPRG00000012032 I
ATF3 Ochotona princeps ENSOPRG00000013252 I
Ogr08030 Ophisaurus gracilis Ogr08030 I
Ogr11165 Ophisaurus gracilis Ogr11165 I
Ogr13525 Ophisaurus gracilis Ogr13525 I
ENSONIG00000015264 Oreochromis niloticus ENSONIG00000015264 I
ENSONIG00000015266 Oreochromis niloticus ENSONIG00000015266 I
ENSONIG00000015268 Oreochromis niloticus ENSONIG00000015268 I
ENSONIG00000018687 Oreochromis niloticus ENSONIG00000018687 I
ENSONIG00000019549 Oreochromis niloticus ENSONIG00000019549 I
ENSONIG00000020186 Oreochromis niloticus ENSONIG00000020186 I
ATF3 Ornithorhynchus anatinus ENSOANG00000008502 I
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I
FOSL2 Oryctolagus cuniculus ENSOCUG00000010706 I
ATF3 Oryctolagus cuniculus ENSOCUG00000017424 I
ENSOCUG00000023019 Oryctolagus cuniculus ENSOCUG00000023019 I
FOSB Oryzias latipes ENSORLG00000006665 I
jdp2a Oryzias latipes ENSORLG00000016515 I
jdp2b Oryzias latipes ENSORLG00000017506 I
fosl2 Oryzias latipes ENSORLG00000018204 I
atf3 Oryzias latipes ENSORLG00000019980 I
ATF3 Otolemur garnettii ENSOGAG00000005803 I
FOSL2 Otolemur garnettii ENSOGAG00000007339 I
FOSB Otolemur garnettii ENSOGAG00000013790 I
JDP2 Otolemur garnettii ENSOGAG00000024796 I
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I
ENSOARG00000009983 Ovis aries ENSOARG00000009983 I
ENSOARG00000010493 Ovis aries ENSOARG00000010493 I
ENSOARG00000019483 Ovis aries ENSOARG00000019483 I
ATF3 Pan troglodytes ENSPTRG00000001962 I
JDP2 Pan troglodytes ENSPTRG00000006555 I
ENSPANG00000002665 Papio anubis ENSPANG00000002665 I
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I
ENSPANG00000021687 Papio anubis ENSPANG00000021687 I
ENSPANG00000023125 Papio anubis ENSPANG00000023125 I
PHUM288370 Pediculus humanus PHUM288370 I
ENSPSIG00000017967 Pelodiscus sinensis ENSPSIG00000017967 I
ENSPMAG00000000427 Petromyzon marinus ENSPMAG00000000427 I
ENSPMAG00000006157 Petromyzon marinus ENSPMAG00000006157 I
ENSPFOG00000007886 Poecilia formosa ENSPFOG00000007886 I
ENSPFOG00000007903 Poecilia formosa ENSPFOG00000007903 I
ENSPFOG00000007924 Poecilia formosa ENSPFOG00000007924 I
ENSPFOG00000010300 Poecilia formosa ENSPFOG00000010300 I
ENSPFOG00000010981 Poecilia formosa ENSPFOG00000010981 I
ENSPFOG00000015014 Poecilia formosa ENSPFOG00000015014 I
ENSPFOG00000017099 Poecilia formosa ENSPFOG00000017099 I
ENSPFOG00000022460 Poecilia formosa ENSPFOG00000022460 I
Pvit_01216 Pogona vitticeps Pvit_01216 I
Pvit_13387 Pogona vitticeps Pvit_13387 I
Pvit_16646 Pogona vitticeps Pvit_16646 I
Pvit_16996 Pogona vitticeps Pvit_16996 I
ENSPPYG00000000235 Pongo abelii ENSPPYG00000000235 I
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I
ENSPPYG00000010121 Pongo abelii ENSPPYG00000010121 I
ATF3 Procavia capensis ENSPCAG00000000178 I
FOSB Procavia capensis ENSPCAG00000007461 I
FOSL2 Procavia capensis ENSPCAG00000007502 I
JDP2 Pteropus vampyrus ENSPVAG00000000672 I
FOSB Pteropus vampyrus ENSPVAG00000001332 I
Atf3 Rattus norvegicus ENSRNOG00000003745 I
Jdp2 Rattus norvegicus ENSRNOG00000008224 D
Fosb Rattus norvegicus ENSRNOG00000046667 I
Fosl2 Rattus norvegicus ENSRNOG00000052357 I
RPRC001561 Rhodnius prolixus RPRC001561 I
Sakowv30045542m.g Saccoglossus kowalevskii Sakowv30045542m.g I
ENSSHAG00000010413 Sarcophilus harrisii ENSSHAG00000010413 I
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I
SINV20083 Solenopsis invicta SINV20083 I
ATF3 Sus scrofa ENSSSCG00000015595 I
ENSSSCG00000027396 Sus scrofa ENSSSCG00000027396 I
ATF3 Taeniopygia guttata ENSTGUG00000003050 I
JDP2 Taeniopygia guttata ENSTGUG00000012219 I
fosl2 Takifugu rubripes ENSTRUG00000006404 I
jdp2b Takifugu rubripes ENSTRUG00000010344 I
fosb Takifugu rubripes ENSTRUG00000010593 I
atf3 Takifugu rubripes ENSTRUG00000015975 I
jdp2a Takifugu rubripes ENSTRUG00000018323 I
ENSTSYG00000008393 Tarsius syrichta ENSTSYG00000008393 I
ENSTSYG00000010193 Tarsius syrichta ENSTSYG00000010193 I
atf3 Tetraodon nigroviridis ENSTNIG00000002524 I
fosb Tetraodon nigroviridis ENSTNIG00000007735 I
ENSTNIG00000016355 Tetraodon nigroviridis ENSTNIG00000016355 I
jdp2a Tetraodon nigroviridis ENSTNIG00000017406 I
fosl2 Tetraodon nigroviridis ENSTNIG00000018774 I
TC008201 Tribolium castaneum TC008201 I
FOSL2 Tupaia belangeri ENSTBEG00000002195 I
ATF3 Tupaia belangeri ENSTBEG00000002717 I
FOSB Tupaia belangeri ENSTBEG00000010222 I
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I
FOSB Tursiops truncatus ENSTTRG00000008316 I
FOSL2 Tursiops truncatus ENSTTRG00000012544 I
ATF3 Tursiops truncatus ENSTTRG00000013897 I
Tal_R002996 Tyto alba Tal_R002996 I
FOSB Vicugna pacos ENSVPAG00000010030 I
ATF3 Vicugna pacos ENSVPAG00000011563 I
fos.L Xenopus laevis XB-GENE-17337595 I
atf3.L Xenopus laevis XB-GENE-6085256 I
fosl2.L Xenopus laevis XB-GENE-6252038 I
atf3 Xenopus tropicalis XB-GENE-6085251 I
fosl2 Xenopus tropicalis XB-GENE-6258093 I
fosb Xenopus tropicalis XB-GENE-6258697 I
fos Xenopus tropicalis XB-GENE-866811 I
ENSXMAG00000004013 Xiphophorus maculatus ENSXMAG00000004013 I
ENSXMAG00000004443 Xiphophorus maculatus ENSXMAG00000004443 I
ENSXMAG00000013196 Xiphophorus maculatus ENSXMAG00000013196 I
ENSXMAG00000014805 Xiphophorus maculatus ENSXMAG00000014805 I
ENSXMAG00000018459 Xiphophorus maculatus ENSXMAG00000018459 I
ENSXMAG00000018663 Xiphophorus maculatus ENSXMAG00000018663 I
L798_12793 Zootermopsis nevadensis L798_12793 I