CpipJ_CPIJ016825 (Culex pipiens)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 CpipJ_CPIJ016825 T319279_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.822 0.822
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.822 0.822
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.822 0.822
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.822 0.822
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.711 0.711
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.711 0.711
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.711 0.711
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.711 0.711
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.711 0.711
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.711 0.711
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.711 0.711
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.711 0.711
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.711 0.711
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.711 0.711
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.711 0.711
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ016825-RA Runt 28 72

Links

Other Runt family TFs
Other Culex pipiens TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004627 Ailuropoda melanoleuca ENSAMEG00000004627 N 0.000
Alligator_sinensis_CCG017296.1 Alligator sinensis Alligator_sinensis_CCG017296.1 N 0.000
ENSAPLG00000014433 Anas platyrhynchos ENSAPLG00000014433 N 0.000
Afo_R003498 Aptenodytes forsteri Afo_R003498 N 0.000
ENSBTAP00000026641-D1 Bos grunniens ENSBTAP00000026641-D1 N 0.000
ZNF800 Bos taurus ENSBTAG00000020004 N 0.000
Brh_R001393 Buceros rhinoceros Brh_R001393 N 0.000
ZNF800 Callithrix jacchus ENSCJAG00000017598 N 0.000
Aan_R000390 Calypte anna Aan_R000390 N 0.000
ZNF800 Canis familiaris ENSCAFG00000001733 N 0.000
ZNF800 Cavia porcellus ENSCPOG00000007495 N 0.000
Cmyd_10009488 Chelonia mydas Cmyd_10009488 N 0.000
ENSCSAG00000010217 Chlorocebus sabaeus ENSCSAG00000010217 N 0.000
ZNF800 Dasypus novemcinctus ENSDNOG00000009240 N 0.000
ENSDORG00000000999 Dipodomys ordii ENSDORG00000000999 N 0.000
ZNF800 Equus caballus ENSECAG00000019340 N 0.000
ZNF800 Erinaceus europaeus ENSEEUG00000002568 N 0.000
ZNF800 Felis catus ENSFCAG00000025630 N 0.000
ENSFALG00000009810 Ficedula albicollis ENSFALG00000009810 N 0.000
ENSGALG00000028694 Gallus gallus ENSGALG00000028694 N 0.000
Gfo_R005807 Geospiza fortis Gfo_R005807 N 0.000
ZNF800 Homo sapiens ENSG00000048405 N 0.000
ENSSTOG00000023294 Ictidomys tridecemlineatus ENSSTOG00000023294 N 0.000
ENSLACG00000012830 Latimeria chalumnae ENSLACG00000012830 N 0.000
ZNF800 Loxodonta africana ENSLAFG00000000456 N 0.000
ENSP00000376989 Macaca fascicularis ENSP00000376989 N 0.000
ZNF800 Macaca mulatta ENSMMUG00000002428 N 0.000
ZNF800 Meleagris gallopavo ENSMGAG00000008232 N 0.000
ZNF800 Monodelphis domestica ENSMODG00000015235 N 0.000
ENSMPUG00000006731 Mustela putorius furo ENSMPUG00000006731 N 0.000
Zfp800 Mus musculus ENSMUSG00000039841 N 0.000
Myotis_brandtii_ZNF800_10010521 Myotis brandtii Myotis_brandtii_ZNF800_10010521 N 0.000
ZNF800 Myotis lucifugus ENSMLUG00000011636 N 0.000
ENSNLEG00000012232 Nomascus leucogenys ENSNLEG00000012232 N 0.000
ZNF800 Ochotona princeps ENSOPRG00000007468 N 0.000
Ogr08884 Ophisaurus gracilis Ogr08884 N 0.000
ZNF800 Ornithorhynchus anatinus ENSOANG00000000823 N 0.000
ZNF800 Oryctolagus cuniculus ENSOCUG00000002127 N 0.000
ZNF800 Otolemur garnettii ENSOGAG00000000339 N 0.000
ENSOARG00000001711 Ovis aries ENSOARG00000001711 N 0.000
ZNF800 Pan troglodytes ENSPTRG00000019649 N 0.000
ENSPANG00000009849 Papio anubis ENSPANG00000009849 N 0.000
ENSPSIG00000013613 Pelodiscus sinensis ENSPSIG00000013613 N 0.000
Pvit_08298 Pogona vitticeps Pvit_08298 N 0.000
ENSPPYG00000017967 Pongo abelii ENSPPYG00000017967 N 0.000
ZNF800 Procavia capensis ENSPCAG00000010526 N 0.000
ZNF800 Pteropus vampyrus ENSPVAG00000013938 N 0.000
Zfp800 Rattus norvegicus ENSRNOG00000007662 N 0.000
ENSSHAG00000014391 Sarcophilus harrisii ENSSHAG00000014391 N 0.000
ZNF800 Sorex araneus ENSSARG00000011650 N 0.000
ZNF800 Sus scrofa ENSSSCG00000024157 N 0.000
ZNF800 Taeniopygia guttata ENSTGUG00000004194 N 0.000
ENSTSYG00000012016 Tarsius syrichta ENSTSYG00000012016 N 0.000
ZNF800 Tupaia belangeri ENSTBEG00000010278 N 0.000
ZNF800 Tursiops truncatus ENSTTRG00000002541 N 0.000
Tal_R009959 Tyto alba Tal_R009959 N 0.000
ZNF800 Vicugna pacos ENSVPAG00000008299 N 0.000