CpipJ_CPIJ016825 (Culex pipiens)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 CpipJ_CPIJ016825 T319279_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.822 0.822
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.822 0.822
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.822 0.822
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.822 0.822
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.711 0.711
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.711 0.711
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.711 0.711
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.711 0.711
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.711 0.711
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.711 0.711
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.711 0.711
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.711 0.711
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.711 0.711
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.711 0.711
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.711 0.711
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.711 0.711
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ016825-RA Runt 28 72

Links

Other Runt family TFs
Other Culex pipiens TFs

161 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPIJ016825 Culex quinquefasciatus CPIJ016825 I 1.000
MESCA007078 Megaselia scalaris MESCA007078 I 0.919
AALB007752 Anopheles albimanus AALB007752 I 0.900
AMAM011616 Anopheles maculatus AMAM011616 I 0.880
ACEP16400 Atta cephalotes ACEP16400 I 0.857
AAEL006160 Aedes aegypti AAEL006160 I 0.844
TC005566 Tribolium castaneum TC005566 I 0.844
AATE002063 Anopheles atroparvus AATE002063 I 0.844
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.844
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.833
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.822
lz Drosophila melanogaster FBgn0002576 D 0.822
GG18309 Drosophila erecta FBgn0110525 I 0.822
GI14398 Drosophila mojavensis FBgn0137150 I 0.822
GL16499 Drosophila persimilis FBgn0154103 I 0.822
GM22478 Drosophila sechellia FBgn0177348 I 0.822
GD16951 Drosophila simulans FBgn0188530 I 0.822
GJ18742 Drosophila virilis FBgn0205894 I 0.822
GK25373 Drosophila willistoni FBgn0227332 I 0.822
GE17788 Drosophila yakuba FBgn0235232 I 0.822
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.822
NV11000 Nasonia vitripennis NV11000 I 0.822
YQE_12218 Dendroctonus ponderosae YQE_12218 I 0.822
Cflo_03911--XP_394014.2_APIME Camponotus floridanus Cflo_03911--XP_394014.2_APIME I 0.822
ADAC004330 Anopheles darlingi ADAC004330 I 0.800
DAPPUDRAFT_290557 Daphnia pulex DAPPUDRAFT_290557 I 0.800
HMEL009842 Heliconius melpomene HMEL009842 I 0.800
KGM_21075 Danaus plexippus KGM_21075 I 0.800
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.800
ACUA008762 Anopheles culicifacies ACUA008762 I 0.800
runx2b Danio rerio ENSDARG00000059233 I 0.795
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.789
CABZ01102124.1 Danio rerio ENSDARG00000103592 I 0.789
ACEP16394 Atta cephalotes ACEP16394 I 0.786
RPRC005391 Rhodnius prolixus RPRC005391 I 0.778
TC005796 Tribolium castaneum TC005796 I 0.778
TC006536 Tribolium castaneum TC006536 I 0.778
TriadG25179 Trichoplax adhaerens TriadG25179 I 0.778
CLEC011124 Cimex lectularius CLEC011124 I 0.778
LCUP002647 Lucilia cuprina LCUP002647 I 0.778
LCUP002656 Lucilia cuprina LCUP002656 I 0.778
LDEC020504 Leptinotarsa decemlineata LDEC020504 N 0.778
MDOA010744 Musca domestica MDOA010744 I 0.778
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I 0.756
ACEP16406 Atta cephalotes ACEP16406 I 0.756
CPIJ006373 Culex quinquefasciatus CPIJ006373 I 0.756
ENSAMXG00000000881 Astyanax mexicanus ENSAMXG00000000881 I 0.756
MCINX000302 Melitaea cinxia MCINX000302 I 0.756
PHUM333300 Pediculus humanus PHUM333300 I 0.756
PHUM333340 Pediculus humanus PHUM333340 I 0.756
SINV13317 Solenopsis invicta SINV13317 I 0.756
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.756
Cflo_03913--XP_394013.3_APIME Camponotus floridanus Cflo_03913--XP_394013.3_APIME I 0.756
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 0.756
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.756
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.756
PPAI007797 Phlebotomus papatasi PPAI007797 I 0.756
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.733
AGAP002506 Anopheles gambiae AGAP002506 I 0.733
CapteG142159 Capitella teleta CapteG142159 I 0.733
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.733
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.733
ENSLOCG00000002744 Lepisosteus oculatus ENSLOCG00000002744 I 0.733
NV10998 Nasonia vitripennis NV10998 I 0.733
Sakowv30005496m.g Saccoglossus kowalevskii Sakowv30005496m.g I 0.733
AARA004356 Anopheles arabiensis AARA004356 I 0.733
AEPI003479 Anopheles epiroticus AEPI003479 I 0.733
AFAF013225 Anopheles farauti AFAF013225 I 0.733
AMEM017856 Anopheles merus AMEM017856 I 0.733
LCUP002653 Lucilia cuprina LCUP002653 N 0.732
ACEP16410 Atta cephalotes ACEP16410 I 0.711
BGIBMGA008906 Bombyx mori BGIBMGA008906 I 0.711
DAPPUDRAFT_290556 Daphnia pulex DAPPUDRAFT_290556 N 0.711
RUNX2 Anolis carolinensis ENSACAG00000013003 I 0.711
ENSAMEG00000009223 Ailuropoda melanoleuca ENSAMEG00000009223 I 0.711
ENSAMXG00000004048 Astyanax mexicanus ENSAMXG00000004048 I 0.711
ENSAMXG00000017349 Astyanax mexicanus ENSAMXG00000017349 I 0.711
RUNX2 Bos taurus ENSBTAG00000004104 I 0.711
ENSCAFG00000031052 Canis familiaris ENSCAFG00000031052 I 0.711
RUNX2 Cavia porcellus ENSCPOG00000005277 I 0.711
ENSCSAG00000012528 Chlorocebus sabaeus ENSCSAG00000012528 I 0.711
runx2a Danio rerio ENSDARG00000040261 I 0.711
runx3 Danio rerio ENSDARG00000052826 I 0.711
RUNX2 Dasypus novemcinctus ENSDNOG00000034361 I 0.711
RUNX2 Equus caballus ENSECAG00000020875 I 0.711
RUNX2 Erinaceus europaeus ENSEEUG00000009243 I 0.711
ENSFALG00000001493 Ficedula albicollis ENSFALG00000001493 I 0.711
RUNX2 Felis catus ENSFCAG00000022480 I 0.711
RUNX2 Homo sapiens ENSG00000124813 D 0.711
runx3 Gasterosteus aculeatus ENSGACG00000007301 I 0.711
runx2b Gasterosteus aculeatus ENSGACG00000012322 I 0.711
ENSGALG00000026484 Gallus gallus ENSGALG00000026484 I 0.711
RUNX2 Gorilla gorilla ENSGGOG00000012890 I 0.711
ENSGMOG00000010468 Gadus morhua ENSGMOG00000010468 I 0.711
ENSGMOG00000014088 Gadus morhua ENSGMOG00000014088 I 0.711
ENSLACG00000011545 Latimeria chalumnae ENSLACG00000011545 I 0.711
RUNX2 Loxodonta africana ENSLAFG00000005054 I 0.711
ENSLOCG00000015816 Lepisosteus oculatus ENSLOCG00000015816 I 0.711
RUNX2 Myotis lucifugus ENSMLUG00000000514 I 0.711
RUNX2 Macaca mulatta ENSMMUG00000019819 I 0.711
RUNX2 Monodelphis domestica ENSMODG00000018912 I 0.711
ENSMPUG00000012508 Mustela putorius furo ENSMPUG00000012508 I 0.711
Runx2 Mus musculus ENSMUSG00000039153 D 0.711
ENSNLEG00000003611 Nomascus leucogenys ENSNLEG00000003611 I 0.711
RUNX2 Ornithorhynchus anatinus ENSOANG00000008265 I 0.711
ENSOCUG00000011739 Oryctolagus cuniculus ENSOCUG00000011739 I 0.711
RUNX2 Otolemur garnettii ENSOGAG00000003900 I 0.711
ENSONIG00000001025 Oreochromis niloticus ENSONIG00000001025 I 0.711
ENSONIG00000008210 Oreochromis niloticus ENSONIG00000008210 I 0.711
RUNX2 Ochotona princeps ENSOPRG00000002943 I 0.711
runx2 Oryzias latipes ENSORLG00000010169 I 0.711
runx3 Oryzias latipes ENSORLG00000017515 I 0.711
ENSPANG00000006186 Papio anubis ENSPANG00000006186 I 0.711
ENSPFOG00000003997 Poecilia formosa ENSPFOG00000003997 I 0.711
ENSPFOG00000016115 Poecilia formosa ENSPFOG00000016115 I 0.711
ENSPPYG00000001714 Pongo abelii ENSPPYG00000001714 I 0.711
ENSPPYG00000016664 Pongo abelii ENSPPYG00000016664 I 0.711
RUNX2 Pan troglodytes ENSPTRG00000018228 I 0.711
Runx2 Rattus norvegicus ENSRNOG00000020193 I 0.711
ENSSHAG00000009950 Sarcophilus harrisii ENSSHAG00000009950 I 0.711
ENSSSCG00000025551 Sus scrofa ENSSSCG00000025551 I 0.711
ENSSTOG00000010163 Ictidomys tridecemlineatus ENSSTOG00000010163 I 0.711
RUNX2 Tupaia belangeri ENSTBEG00000000948 I 0.711
RUNX2 Taeniopygia guttata ENSTGUG00000013249 I 0.711
runx2b Tetraodon nigroviridis ENSTNIG00000009685 I 0.711
runx3 Tetraodon nigroviridis ENSTNIG00000016911 I 0.711
runx3 Takifugu rubripes ENSTRUG00000001517 I 0.711
runx2 Takifugu rubripes ENSTRUG00000003501 I 0.711
runx1 Takifugu rubripes ENSTRUG00000012611 I 0.711
RUNX2 Tursiops truncatus ENSTTRG00000006943 I 0.711
ENSXMAG00000003400 Xiphophorus maculatus ENSXMAG00000003400 I 0.711
ENSXMAG00000018835 Xiphophorus maculatus ENSXMAG00000018835 I 0.711
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.711
GF15967 Drosophila ananassae FBgn0092990 I 0.711
GG19691 Drosophila erecta FBgn0111893 I 0.711
GH17737 Drosophila grimshawi FBgn0125207 I 0.711
GL15800 Drosophila persimilis FBgn0153404 I 0.711
GM23044 Drosophila sechellia FBgn0177912 I 0.711
GD17495 Drosophila simulans FBgn0189047 I 0.711
GJ19245 Drosophila virilis FBgn0206390 I 0.711
GK19810 Drosophila willistoni FBgn0221808 I 0.711
GE17890 Drosophila yakuba FBgn0235328 I 0.711
RunxB Drosophila melanogaster FBgn0259162 I 0.711
GB52719 Apis mellifera GB52719 I 0.711
KGM_21067 Danaus plexippus KGM_21067 I 0.711
TC006542 Tribolium castaneum TC006542 I 0.711
Afo_R012718 Aptenodytes forsteri Afo_R012718 I 0.711
Alligator_sinensis_CCG001676.1 Alligator sinensis Alligator_sinensis_CCG001676.1 I 0.711
Cflo_03910--XP_001121886.1_APIME Camponotus floridanus Cflo_03910--XP_001121886.1_APIME I 0.711
Cmyd_10020455 Chelonia mydas Cmyd_10020455 I 0.711
ENSBTAP00000006227-D1 Bos grunniens ENSBTAP00000006227-D1 I 0.711
ENSP00000352514 Macaca fascicularis ENSP00000352514 I 0.711
Gfo_R000714 Geospiza fortis Gfo_R000714 I 0.711
Pvit_01165 Pogona vitticeps Pvit_01165 I 0.711
CLEC011126 Cimex lectularius CLEC011126 N 0.711
runx3 Xenopus tropicalis XB-GENE-487784 I 0.711
runx2.L Xenopus laevis XB-GENE-864817 I 0.711
AALB009220 Anopheles albimanus AALB009220 I 0.711
BGLB004758 Biomphalaria glabrata BGLB004758 I 0.711
MDOA013149 Musca domestica MDOA013149 I 0.711
MCINX000297 Melitaea cinxia MCINX000297 N 0.710