ACEP16406 (Atta cephalotes)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ACEP16406 T319291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.717 0.717
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.717 0.717
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.717 0.717
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP16406-PA Runt 5 50

Links

Other Runt family TFs
Other Atta cephalotes TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HMEL009842 Heliconius melpomene HMEL009842 I 0.846
AMAM011616 Anopheles maculatus AMAM011616 I 0.840
AQUA009446 Anopheles quadriannulatus AQUA009446 I 0.840
ACEP16400 Atta cephalotes ACEP16400 I 0.833
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.833
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I 0.825
CPIJ006373 Culex quinquefasciatus CPIJ006373 I 0.825
HMEL014739 Heliconius melpomene HMEL014739 I 0.800
KGM_21065 Danaus plexippus KGM_21065 I 0.800
MESCA007078 Megaselia scalaris MESCA007078 I 0.784
AALB007752 Anopheles albimanus AALB007752 I 0.775
runx2b Danio rerio ENSDARG00000059233 I 0.769
SINV13405 Solenopsis invicta SINV13405 I 0.767
ENSAPLG00000007026 Anas platyrhynchos ENSAPLG00000007026 I 0.763
CABZ01102124.1 Danio rerio ENSDARG00000103592 I 0.763
ENSMGAG00000002035 Meleagris gallopavo ENSMGAG00000002035 I 0.763
Gfo_R013848 Geospiza fortis Gfo_R013848 I 0.763
CpipJ_CPIJ016825 Culex pipiens CpipJ_CPIJ016825 I 0.756
CPIJ016825 Culex quinquefasciatus CPIJ016825 I 0.756
LCUP002647 Lucilia cuprina LCUP002647 I 0.744
LCUP002656 Lucilia cuprina LCUP002656 I 0.738
CLEC011124 Cimex lectularius CLEC011124 I 0.717
SNAPOd2T00000189001 Oikopleura dioica SNAPOd2T00000189001 I 0.700