SINV13405 (Solenopsis invicta)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 SINV13405 T319622_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.833 0.833
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.833 0.833
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.833 0.833
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.833 0.833
run
M06444_2.00 		Drosophila melanogaster
WAACCGCAR
YTGCGGTTW		 B1H
Zhu et al.(2011)
run_Bgb_NBT_FBgn0003300 		0.700 0.700
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SINV13405-PA Runt 1 30

Links

Other Runt family TFs
Other Solenopsis invicta TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Hsal_04635--XP_394013.3_APIME Harpegnathos saltator Hsal_04635--XP_394013.3_APIME I 1.000
HMEL014739 Heliconius melpomene HMEL014739 I 0.900
KGM_21065 Danaus plexippus KGM_21065 I 0.900
ACYPI001442 Acyrthosiphon pisum ACYPI001442 I 0.867
MCINX000302 Melitaea cinxia MCINX000302 I 0.867
AMAM011616 Anopheles maculatus AMAM011616 I 0.840
AQUA009446 Anopheles quadriannulatus AQUA009446 I 0.840
AAEL006160 Aedes aegypti AAEL006160 I 0.833
tetur01g02340 Tetranychus urticae tetur01g02340 I 0.833
AATE002063 Anopheles atroparvus AATE002063 I 0.833
ASTEI07771 Anopheles stephensi ASTEI07771 I 0.833
PPAI007797 Phlebotomus papatasi PPAI007797 I 0.800
PPAI006591 Phlebotomus papatasi PPAI006591 I 0.792
CpipJ_CPIJ006373 Culex pipiens CpipJ_CPIJ006373 I 0.767
ACEP16406 Atta cephalotes ACEP16406 I 0.767
ACYPI007541 Acyrthosiphon pisum ACYPI007541 I 0.767
CPIJ006373 Culex quinquefasciatus CPIJ006373 I 0.767
RPRC005391 Rhodnius prolixus RPRC005391 I 0.767
SINV13317 Solenopsis invicta SINV13317 I 0.767
TC006536 Tribolium castaneum TC006536 I 0.767
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.767
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.767
CLEC011124 Cimex lectularius CLEC011124 I 0.767
CpipJ_CPIJ019508 Culex pipiens CpipJ_CPIJ019508 I 0.733
ACEP16410 Atta cephalotes ACEP16410 I 0.733
CPIJ019508 Culex quinquefasciatus CPIJ019508 I 0.733
KGM_21067 Danaus plexippus KGM_21067 I 0.733
CLEC011126 Cimex lectularius CLEC011126 N 0.733
ADIR002676 Anopheles dirus ADIR002676 I 0.733
AFAF013225 Anopheles farauti AFAF013225 I 0.733
ACEP16394 Atta cephalotes ACEP16394 I 0.714
ENSLACG00000013776 Latimeria chalumnae ENSLACG00000013776 I 0.700
ENSLACG00000015930 Latimeria chalumnae ENSLACG00000015930 I 0.700
GA13742 Drosophila pseudoobscura FBgn0073778 I 0.700
GF15967 Drosophila ananassae FBgn0092990 I 0.700
GG19691 Drosophila erecta FBgn0111893 I 0.700
GH17737 Drosophila grimshawi FBgn0125207 I 0.700
GL15800 Drosophila persimilis FBgn0153404 I 0.700
GM23044 Drosophila sechellia FBgn0177912 I 0.700
GD17495 Drosophila simulans FBgn0189047 I 0.700
GJ19245 Drosophila virilis FBgn0206390 I 0.700
GK19810 Drosophila willistoni FBgn0221808 I 0.700
GE17890 Drosophila yakuba FBgn0235328 I 0.700
RunxB Drosophila melanogaster FBgn0259162 I 0.700
ML03045a Mnemiopsis leidyi ML03045a I 0.700
BGLB004758 Biomphalaria glabrata BGLB004758 I 0.700