ACEP16406 (Atta cephalotes)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 ACEP16406 T319291_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.717 0.717
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.717 0.717
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.717 0.717
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.717 0.717
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACEP16406-PA Runt 5 50

Links

Other Runt family TFs
Other Atta cephalotes TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30030701m.g Saccoglossus kowalevskii Sakowv30030701m.g N 0.000
Sakowv30037170m.g Saccoglossus kowalevskii Sakowv30037170m.g N 0.000
Sakowv30037169m.g Saccoglossus kowalevskii Sakowv30037169m.g N 0.000
Sakowv30037168m.g Saccoglossus kowalevskii Sakowv30037168m.g N 0.000
Sakowv30037167m.g Saccoglossus kowalevskii Sakowv30037167m.g N 0.000
Sakowv30037166m.g Saccoglossus kowalevskii Sakowv30037166m.g N 0.000
Sakowv30037164m.g Saccoglossus kowalevskii Sakowv30037164m.g N 0.000
Sakowv30037162m.g Saccoglossus kowalevskii Sakowv30037162m.g N 0.000
Sakowv30037160m.g Saccoglossus kowalevskii Sakowv30037160m.g N 0.000
Sakowv30037159m.g Saccoglossus kowalevskii Sakowv30037159m.g N 0.000
Sakowv30037158m.g Saccoglossus kowalevskii Sakowv30037158m.g N 0.000
Sakowv30030705m.g Saccoglossus kowalevskii Sakowv30030705m.g N 0.000
Sakowv30030703m.g Saccoglossus kowalevskii Sakowv30030703m.g N 0.000
Sakowv30025247m.g Saccoglossus kowalevskii Sakowv30025247m.g N 0.000
Sakowv30030700m.g Saccoglossus kowalevskii Sakowv30030700m.g N 0.000
Sakowv30030697m.g Saccoglossus kowalevskii Sakowv30030697m.g N 0.000
Sakowv30030694m.g Saccoglossus kowalevskii Sakowv30030694m.g N 0.000
Sakowv30030692m.g Saccoglossus kowalevskii Sakowv30030692m.g N 0.000
Sakowv30030688m.g Saccoglossus kowalevskii Sakowv30030688m.g N 0.000
Sakowv30030684m.g Saccoglossus kowalevskii Sakowv30030684m.g N 0.000
Sakowv30030683m.g Saccoglossus kowalevskii Sakowv30030683m.g N 0.000
Sakowv30030678m.g Saccoglossus kowalevskii Sakowv30030678m.g N 0.000
Sakowv30030677m.g Saccoglossus kowalevskii Sakowv30030677m.g N 0.000
Sakowv30025251m.g Saccoglossus kowalevskii Sakowv30025251m.g N 0.000
Sakowv30025250m.g Saccoglossus kowalevskii Sakowv30025250m.g N 0.000
Sakowv30025248m.g Saccoglossus kowalevskii Sakowv30025248m.g N 0.000