CPIJ006369 (Culex quinquefasciatus)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00853 (Runt) IPR013524 CPIJ006369 T319315_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Runx1
M08163_2.00 		Mus musculus
HRRCCACARVN
NBYTGTGGYYD		 ChIP-seq
Mathelier et al.(2014)
MA0002.2 		0.747 0.747
RUNX1
M09371_2.00 		Homo sapiens
NWAACCACARV
BYTGTGGTTWN		 Misc
Kulakovskiy et al.(2013)
RUNX1_HUMAN.H11MO.0.A 		0.747 0.747
Runx1
M09372_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX1_MOUSE.H11MO.0.A 		0.747 0.747
RUNX1
M09632_2.00 		Homo sapiens
HAACCACADV
BHTGTGGTTD		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE29180 		0.747 0.747
RUNX1
M09631_2.00 		Homo sapiens
VCCACWTCCTBY
RVAGGAWGTGGB		 Misc
Heinz et al.(2010)
Jurkat-RUNX1_GSE17954 		0.747 0.747
Runx1
M09633_2.00 		Mus musculus
NWAACCACAR
YTGTGGTTWN		 Misc
Heinz et al.(2010)
HPC7-Runx1_GSE22178 		0.747 0.747
RUNX1
M11258_2.00 		Homo sapiens
ACCRCA
TGYGGT		 Transfac
Matys et al.(2006)
V$AML1_01 		0.747 0.747
RUNX1
M11259_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_01 		0.747 0.747
RUNX1
M11260_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4_02 		0.747 0.747
RUNX1
M11261_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q4 		0.747 0.747
RUNX1
M11262_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q5 		0.747 0.747
RUNX1
M11263_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML1_Q6 		0.747 0.747
Runx2
M01307_2.00 		Mus musculus
NHDACCRCAN
NTGYGGTHDN		 PBM
Lambert et al.(2019)
pTH9764 		0.726 0.726
RUNX2
M03468_2.00 		Homo sapiens
HRACCGCAAACCRCRD
HYGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_1 		0.726 0.726
RUNX2
M03469_2.00 		Homo sapiens
HRACCRCADWWACCRCAD
HTGYGGTWWHTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX2_2 		0.726 0.726
RUNX2
M03470_2.00 		Homo sapiens
WAACCRCAR
YTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX2_3 		0.726 0.726
RUNX3
M03464_2.00 		Homo sapiens
HRACCGCAAACCRCAN
NTGYGGTTTGCGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_1 		0.726 0.726
RUNX3
M03465_2.00 		Homo sapiens
WAACCRCARN
NYTGYGGTTW		 SELEX
Jolma et al.(2013)
RUNX3_2 		0.726 0.726
RUNX3
M03466_2.00 		Homo sapiens
HDACCRCADWAACCRCRN
NYGYGGTTWHTGYGGTHD		 SELEX
Jolma et al.(2013)
RUNX3_3 		0.726 0.726
RUNX3
M03467_2.00 		Homo sapiens
HRACCRCAAH
DTTGYGGTYD		 SELEX
Jolma et al.(2013)
RUNX3_4 		0.726 0.726
RUNX3
M02751_2.00 		Homo sapiens
WACCRCAM
KTGYGGTW		 SELEX
Jolma et al.(2010)
RUNX3_monomer 		0.726 0.726
RUNX2
M05733_2.00 		Homo sapiens
NHRACCRCADWAACCRCAVN
NBTGYGGTTWHTGYGGTYDN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_HT-SELEX 		0.726 0.726
RUNX3
M05731_2.00 		Homo sapiens
YWAACCGCAAAAACCGCARV
BYTGCGGTTTTTGCGGTTWR		 SELEX
Yin et al.(2017)
RUNX3_FL_HT-SELEX 		0.726 0.726
RUNX2
M09370_2.00 		Homo sapiens
MMHAACCACAVVMH
DKBBTGTGGTTDKK		 Misc
Kulakovskiy et al.(2013)
RUNX2_HUMAN.H11MO.0.A 		0.726 0.726
RUNX3
M09369_2.00 		Homo sapiens
HAACCACARN
NYTGTGGTTD		 Misc
Kulakovskiy et al.(2013)
RUNX3_HUMAN.H11MO.0.A 		0.726 0.726
Runx2
M09373_2.00 		Mus musculus
VWRACCACARVV
BBYTGTGGTYWB		 Misc
Kulakovskiy et al.(2013)
RUNX2_MOUSE.H11MO.0.A 		0.726 0.726
Runx3
M09374_2.00 		Mus musculus
NHRACCACARVN
NBYTGTGGTYDN		 Misc
Kulakovskiy et al.(2013)
RUNX3_MOUSE.H11MO.0.A 		0.726 0.726
RUNX2
M09630_2.00 		Homo sapiens
NHVACCACANNN
NNNTGTGGTBDN		 Misc
Heinz et al.(2010)
PCa-RUNX2_GSE33889 		0.726 0.726
RUNX3
M11252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3_01 		0.726 0.726
RUNX3
M11253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q3 		0.726 0.726
RUNX3
M11254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML2_Q4 		0.726 0.726
RUNX2
M11255_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q3 		0.726 0.726
RUNX2
M11256_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$AML3_Q6 		0.726 0.726
RUNX2
M11257_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$OSF2_Q6 		0.726 0.726
RUNX2
M05734_2.00 		Homo sapiens
NWAACCACRAAAACCACRRN
NYYGTGGTTTTYGTGGTTWN		 SELEX
Yin et al.(2017)
RUNX2_eDBD_Methyl-HT-SELEX 		0.726 0.726
RUNX3
M05732_2.00 		Homo sapiens
HWAACCACRAAAACCACRARN
NYTYGTGGTTTTYGTGGTTWD		 SELEX
Yin et al.(2017)
RUNX3_FL_Methyl-HT-SELEX 		0.726 0.726
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CPIJ006369-PA Runt 76 170

Links

Other Runt family TFs
Other Culex quinquefasciatus TFs

78 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000009237 Ailuropoda melanoleuca ENSAMEG00000009237 I 0.000
Alligator_sinensis_CCG011609.1 Alligator sinensis Alligator_sinensis_CCG011609.1 I 0.000
ENSAPLG00000003880 Anas platyrhynchos ENSAPLG00000003880 I 0.000
ENSAPLG00000012917 Anas platyrhynchos ENSAPLG00000012917 I 0.000
TP73 Anolis carolinensis ENSACAG00000001622 I 0.000
Afo_R003301 Aptenodytes forsteri Afo_R003301 I 0.000
Afo_R010233 Aptenodytes forsteri Afo_R010233 I 0.000
ENSAMXG00000004843 Astyanax mexicanus ENSAMXG00000004843 I 0.000
ENSAMXG00000013958 Astyanax mexicanus ENSAMXG00000013958 I 0.000
ENSP00000264731-D1 Bos grunniens ENSP00000264731-D1 I 0.000
ENSP00000367545-D1 Bos grunniens ENSP00000367545-D1 I 0.000
TP73 Bos taurus ENSBTAG00000005812 I 0.000
TP63 Bos taurus ENSBTAG00000015460 I 0.000
Brh_R004866 Buceros rhinoceros Brh_R004866 I 0.000
Brh_R005208 Buceros rhinoceros Brh_R005208 I 0.000
TP63 Callithrix jacchus ENSCJAG00000014256 I 0.000
Aan_R005960 Calypte anna Aan_R005960 I 0.000
Aan_R013385 Calypte anna Aan_R013385 I 0.000
TP63 Canis familiaris ENSCAFG00000013961 I 0.000
TP73 Canis familiaris ENSCAFG00000019489 I 0.000
TP73 Cavia porcellus ENSCPOG00000010908 I 0.000
TP63 Cavia porcellus ENSCPOG00000014770 I 0.000
Cmyd_10010564 Chelonia mydas Cmyd_10010564 I 0.000
Cmyd_10015921 Chelonia mydas Cmyd_10015921 I 0.000
ENSCSAG00000000724 Chlorocebus sabaeus ENSCSAG00000000724 I 0.000
ENSCSAG00000009062 Chlorocebus sabaeus ENSCSAG00000009062 I 0.000
TP63 Choloepus hoffmanni ENSCHOG00000010497 I 0.000
tp73 Danio rerio ENSDARG00000017953 I 0.000
tp63 Danio rerio ENSDARG00000044356 I 0.000
TP63 Dasypus novemcinctus ENSDNOG00000016582 I 0.000
Trp63 Dipodomys ordii ENSDORG00000002061 I 0.000
TP73 Equus caballus ENSECAG00000000771 I 0.000
TP63 Equus caballus ENSECAG00000018546 I 0.000
TP73 Erinaceus europaeus ENSEEUG00000013128 I 0.000
TP63 Felis catus ENSFCAG00000000790 I 0.000
TP73 Felis catus ENSFCAG00000011627 I 0.000
ENSFALG00000007393 Ficedula albicollis ENSFALG00000007393 I 0.000
ENSFALG00000009625 Ficedula albicollis ENSFALG00000009625 I 0.000
ENSGMOG00000000413 Gadus morhua ENSGMOG00000000413 I 0.000
TP73 Gallus gallus ENSGALG00000001006 I 0.000
TP63 Gallus gallus ENSGALG00000007324 I 0.000
tp73 Gasterosteus aculeatus ENSGACG00000006547 I 0.000
ENSGACG00000013629 Gasterosteus aculeatus ENSGACG00000013629 I 0.000
Gfo_R004420 Geospiza fortis Gfo_R004420 I 0.000
Gfo_R009749 Geospiza fortis Gfo_R009749 I 0.000
TP63 Gorilla gorilla ENSGGOG00000005113 I 0.000
TP73 Gorilla gorilla ENSGGOG00000015559 I 0.000
TP63 Homo sapiens ENSG00000073282 D 0.000
TP73 Homo sapiens ENSG00000078900 D 0.000
ENSSTOG00000013771 Ictidomys tridecemlineatus ENSSTOG00000013771 I 0.000
ENSSTOG00000029194 Ictidomys tridecemlineatus ENSSTOG00000029194 I 0.000
ENSLACG00000014214 Latimeria chalumnae ENSLACG00000014214 I 0.000
ENSLACG00000019068 Latimeria chalumnae ENSLACG00000019068 I 0.000
ENSLOCG00000005148 Lepisosteus oculatus ENSLOCG00000005148 I 0.000
ENSLOCG00000005255 Lepisosteus oculatus ENSLOCG00000005255 I 0.000
TP73 Loxodonta africana ENSLAFG00000007013 I 0.000
TP63 Loxodonta africana ENSLAFG00000031461 I 0.000
ENSP00000264731 Macaca fascicularis ENSP00000264731 I 0.000
ENSP00000367545 Macaca fascicularis ENSP00000367545 I 0.000
TP63 Macaca mulatta ENSMMUG00000016466 I 0.000
TP73 Macaca mulatta ENSMMUG00000016569 I 0.000
TP73 Meleagris gallopavo ENSMGAG00000001562 I 0.000
TP63 Meleagris gallopavo ENSMGAG00000007535 I 0.000
TP63 Microcebus murinus ENSMICG00000005240 I 0.000
TP63 Monodelphis domestica ENSMODG00000015060 I 0.000
ENSMPUG00000003438 Mustela putorius furo ENSMPUG00000003438 I 0.000
ENSMPUG00000007407 Mustela putorius furo ENSMPUG00000007407 I 0.000
Trp63 Mus musculus ENSMUSG00000022510 D 0.000
Trp73 Mus musculus ENSMUSG00000029026 D 0.000
Myotis_brandtii_Tp63_10011644 Myotis brandtii Myotis_brandtii_Tp63_10011644 I 0.000
TP63 Myotis lucifugus ENSMLUG00000015597 I 0.000
ENSNLEG00000006723 Nomascus leucogenys ENSNLEG00000006723 I 0.000
Ogr07265 Ophisaurus gracilis Ogr07265 I 0.000
Ogr15303 Ophisaurus gracilis Ogr15303 I 0.000
ENSONIG00000002106 Oreochromis niloticus ENSONIG00000002106 I 0.000
ENSONIG00000019325 Oreochromis niloticus ENSONIG00000019325 I 0.000
TP63 Ornithorhynchus anatinus ENSOANG00000013795 I 0.000
TP63 Oryctolagus cuniculus ENSOCUG00000016465 I 0.000
tp73 Oryzias latipes ENSORLG00000004402 I 0.000
tp63 Oryzias latipes ENSORLG00000015665 I 0.000
TP63 Otolemur garnettii ENSOGAG00000003838 I 0.000
TP73 Otolemur garnettii ENSOGAG00000006041 I 0.000
ENSOARG00000015833 Ovis aries ENSOARG00000015833 I 0.000
ENSOARG00000020478 Ovis aries ENSOARG00000020478 I 0.000
TP63 Pan troglodytes ENSPTRG00000015733 I 0.000
ENSPANG00000006656 Papio anubis ENSPANG00000006656 I 0.000
ENSPANG00000010294 Papio anubis ENSPANG00000010294 I 0.000
ENSPSIG00000004164 Pelodiscus sinensis ENSPSIG00000004164 I 0.000
ENSPSIG00000016009 Pelodiscus sinensis ENSPSIG00000016009 I 0.000
ENSPMAG00000009535 Petromyzon marinus ENSPMAG00000009535 I 0.000
ENSPFOG00000000910 Poecilia formosa ENSPFOG00000000910 I 0.000
ENSPFOG00000010828 Poecilia formosa ENSPFOG00000010828 I 0.000
Pvit_07832 Pogona vitticeps Pvit_07832 I 0.000
Pvit_15794 Pogona vitticeps Pvit_15794 I 0.000
ENSPPYG00000014401 Pongo abelii ENSPPYG00000014401 I 0.000
TP73 Procavia capensis ENSPCAG00000000703 I 0.000
TP63 Procavia capensis ENSPCAG00000005011 I 0.000
TP73 Pteropus vampyrus ENSPVAG00000008937 I 0.000
TP63 Pteropus vampyrus ENSPVAG00000009056 I 0.000
Tp63 Rattus norvegicus ENSRNOG00000001924 I 0.000
Tp73 Rattus norvegicus ENSRNOG00000024707 I 0.000
ENSSHAG00000005668 Sarcophilus harrisii ENSSHAG00000005668 I 0.000
TP63 Sorex araneus ENSSARG00000012752 I 0.000
TP63 Sus scrofa ENSSSCG00000025592 I 0.000
TP73 Sus scrofa ENSSSCG00000025685 I 0.000
TP73 Taeniopygia guttata ENSTGUG00000002743 I 0.000
TP63 Taeniopygia guttata ENSTGUG00000009377 I 0.000
tp63 Takifugu rubripes ENSTRUG00000003420 I 0.000
tp73 Takifugu rubripes ENSTRUG00000014931 I 0.000
ENSTSYG00000003709 Tarsius syrichta ENSTSYG00000003709 I 0.000
tp73 Tetraodon nigroviridis ENSTNIG00000011978 I 0.000
tp63 Tetraodon nigroviridis ENSTNIG00000013774 I 0.000
TP63 Tupaia belangeri ENSTBEG00000004215 I 0.000
TP73 Tursiops truncatus ENSTTRG00000003435 I 0.000
TP63 Tursiops truncatus ENSTTRG00000011638 I 0.000
Tal_R007660 Tyto alba Tal_R007660 I 0.000
TP63 Vicugna pacos ENSVPAG00000012350 I 0.000
tp63.L Xenopus laevis XB-GENE-865317 I 0.000
tp63 Xenopus tropicalis XB-GENE-479868 I 0.000
tp73 Xenopus tropicalis XB-GENE-482857 I 0.000
ENSXMAG00000016425 Xiphophorus maculatus ENSXMAG00000016425 I 0.000
ENSXMAG00000017360 Xiphophorus maculatus ENSXMAG00000017360 I 0.000