LCUP002648 (Lucilia cuprina)
Runt

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00853 (Runt) IPR013524 LCUP002648 T319688_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lz
M03964_2.00 		Drosophila melanogaster
HRACCGCAAHM
KDTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_1 		0.784 0.784
lz
M03965_2.00 		Drosophila melanogaster
HVACCRCARWAACCRCAV
BTGYGGTTWYTGYGGTBD		 SELEX
Nitta et al.(2015)
lz_2 		0.784 0.784
lz
M03966_2.00 		Drosophila melanogaster
WRACCRCAWTAACCRCAA
TTGYGGTTAWTGYGGTYW		 SELEX
Nitta et al.(2015)
lz_3 		0.784 0.784
lz
M03967_2.00 		Drosophila melanogaster
HRACCGCAAAACCRCAR
YTGYGGTTTTGCGGTYD		 SELEX
Nitta et al.(2015)
lz_4 		0.784 0.784
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
LCUP002648-PA Runt 210 306

Links

Other Runt family TFs
Other Lucilia cuprina TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL007040 Aedes aegypti AAEL007040 I 0.742
AALB009220 Anopheles albimanus AALB009220 I 0.753
AARA004356 Anopheles arabiensis AARA004356 I 0.742
AATE018583 Anopheles atroparvus AATE018583 N 0.753
ACHR004078 Anopheles christyi ACHR004078 I 0.742
ACOM036889 Anopheles coluzzii ACOM036889 N 0.722
ACUA000036 Anopheles culicifacies ACUA000036 I 0.722
AEPI003479 Anopheles epiroticus AEPI003479 I 0.742
AFUN005474 Anopheles funestus AFUN005474 I 0.722
AGAP002506 Anopheles gambiae AGAP002506 I 0.742
AMEC020337 Anopheles melas AMEC020337 N 0.753
AMEM017856 Anopheles merus AMEM017856 I 0.742
AMIN002518 Anopheles minimus AMIN002518 I 0.742
AQUA009447 Anopheles quadriannulatus AQUA009447 N 0.732
ASTEI07959 Anopheles stephensi ASTEI07959 I 0.742
ACEP16409 Atta cephalotes ACEP16409 I 0.732
Cflo_03909--XP_394016.2_APIME Camponotus floridanus Cflo_03909--XP_394016.2_APIME I 0.753
CLEC011116 Cimex lectularius CLEC011116 I 0.732
CpipJ_CPIJ006372 Culex pipiens CpipJ_CPIJ006372 I 0.722
CPIJ006372 Culex quinquefasciatus CPIJ006372 I 0.722
GG18309 Drosophila erecta FBgn0110525 I 0.784
GH11831 Drosophila grimshawi FBgn0119310 I 0.732
lz Drosophila melanogaster FBgn0002576 D 0.784
GI14398 Drosophila mojavensis FBgn0137150 I 0.794
GL16499 Drosophila persimilis FBgn0154103 I 0.784
GA22609 Drosophila pseudoobscura FBgn0244012 I 0.784
GM22478 Drosophila sechellia FBgn0177348 I 0.784
GD16951 Drosophila simulans FBgn0188530 I 0.732
GJ18742 Drosophila virilis FBgn0205894 I 0.794
GK25373 Drosophila willistoni FBgn0227332 I 0.773
GE17788 Drosophila yakuba FBgn0235232 I 0.784
Hsal_12319--XP_394016.2_APIME Harpegnathos saltator Hsal_12319--XP_394016.2_APIME I 0.753
LLOJ002717 Lutzomyia longipalpis LLOJ002717 I 0.732
MDOA010744 Musca domestica MDOA010744 I 0.897
PHUM333300 Pediculus humanus PHUM333300 I 0.732
PPAI005889 Phlebotomus papatasi PPAI005889 I 0.722
PPAI010986 Phlebotomus papatasi PPAI010986 I 0.711
RPRC005391 Rhodnius prolixus RPRC005391 I 0.763
SINV13317 Solenopsis invicta SINV13317 I 0.753
TC005796 Tribolium castaneum TC005796 I 0.742