AMTR_s00057p00091350 (Amborella trichopoda)
RWP-RK

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02042 (RWP-RK) IPR003035 AMTR_s00057p00091350 T319885_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RKD2
M07249_2.00 		Arabidopsis thaliana
NHGWCBNTTCRDCTTCYHN
NDRGAAGHYGAANVGWCDN		 Dap-seq
OMalley et al.(2016)
RKD2_col_a 		0.730 0.730
RKD2
M07250_2.00 		Arabidopsis thaliana
GWCBBTTCRDMTTCC
GGAAKHYGAAVVGWC		 Dap-seq
OMalley et al.(2016)
RKD2_colamp_a 		0.730 0.730
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN16802 RWP-RK 1 37

Links

Other RWP-RK family TFs
Other Amborella trichopoda TFs

146 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RBPJ Homo sapiens ENSG00000168214 D
MELLADRAFT_116290 Melampsora laricipopulina MELLADRAFT_116290 N
PGTG_09016 Puccinia graminis PGTG_09016 N
PGTG_18855 Puccinia graminis PGTG_18855 N
GLOINDRAFT_27407 Rhizophagus irregularis GLOINDRAFT_27407 N