CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.005G204800
(
Gossypium raimondii
)
SAND
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01342 (SAND)
IPR000770
Gorai.005G204800
T322253_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.005G204800.1
SAND
27
117
KGRDFIEVTCGCTSHRYGDAVGKLRVFSNGDLEITCECTPGCNEDKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVSLSKTALLKYYNQA
Gorai.005G204800.2
SAND
27
117
KGRDFIEVTCGCTSHRYGDAVGKLRVFSNGDLEITCECTPGCNEDKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVSLSKTALLKYYNQA
Gorai.005G204800.3
SAND
27
116
KGRDFIEVTCGCTSHRYGDAVGKLRVFSNGDLEITCECTPGCNEDKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVSLSKTALLKYYNQ
Links
Other
SAND
family TFs
Other
Gossypium raimondii
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_03580
Ancylostoma caninum
ANCCAN_03580
N
ANCDUO_13422
Ancylostoma duodenale
ANCDUO_13422
N
ANCDUO_20998
Ancylostoma duodenale
ANCDUO_20998
N
ANCDUO_27038
Ancylostoma duodenale
ANCDUO_27038
N
ACAC_0000295001
Angiostrongylus cantonensis
ACAC_0000295001
N
ACOC_0001179101
Angiostrongylus costaricensis
ACOC_0001179101
N
CBN29316
Caenorhabditis brenneri
CBN29316
N
CJA19534
Caenorhabditis japonica
CJA19534
N
DICVIV_06577
Dictyocaulus viviparus
DICVIV_06577
N
HCOI01507800
Haemonchus contortus
HCOI01507800
N
HPLM_0001739001
Haemonchus placei
HPLM_0001739001
N
Hba_01090
Heterorhabditis bacteriophora
Hba_01090
N
NECAME_01050
Necator americanus
NECAME_01050
N
OESDEN_13068
Oesophagostomum dentatum
OESDEN_13068
N