CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CJA19534
(
Caenorhabditis japonica
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CJA19534
T327075_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CJA19534
Sox
137
203
PKRNRSAYVHFIISRRASYSKATTSQRDINIGLAREWSNLGDEARKPFYKKAEDEKKEYVALMEVYK
Links
Other
Sox
family TFs
Other
Caenorhabditis japonica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CBN29316
Caenorhabditis brenneri
CBN29316
N
0.696
CRE14187
Caenorhabditis remanei
CRE14187
N
0.662
CBG08719
Caenorhabditis briggsae
CBG08719
N
0.638
hmg-20
Caenorhabditis elegans
WBGene00012209
N
0.610
NECAME_01050
Necator americanus
NECAME_01050
N
0.445
ANCDUO_13422
Ancylostoma duodenale
ANCDUO_13422
N
0.427
ANCDUO_27038
Ancylostoma duodenale
ANCDUO_27038
N
0.427
DICVIV_06577
Dictyocaulus viviparus
DICVIV_06577
N
0.427
ACAC_0000295001
Angiostrongylus cantonensis
ACAC_0000295001
N
0.417
ACOC_0001179101
Angiostrongylus costaricensis
ACOC_0001179101
N
0.417
ANCCAN_03580
Ancylostoma caninum
ANCCAN_03580
N
0.417
ANCCEY_07403
Ancylostoma ceylanicum
ANCCEY_07403
N
0.417
HCOI01507800
Haemonchus contortus
HCOI01507800
N
0.417
HPLM_0001739001
Haemonchus placei
HPLM_0001739001
N
0.417
OESDEN_13068
Oesophagostomum dentatum
OESDEN_13068
N
0.417