PGSC0003DMG400023260 (Solanum tuberosum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03110 (SBP) IPR004333 PGSC0003DMG400023260 T322929_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL13A
M07265_2.00 		Arabidopsis thaliana
DNYGTACGGWH
DWCCGTACRNH		 Dap-seq
OMalley et al.(2016)
SPL13_col_a 		0.945 0.707
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.912 0.733
fgenesh1_pg.scaffold_252000020
M02481_2.00 		Physcomitrella patens
NNNKRCVNN
NNBGYMNNN		 PBM
Weirauch et al.(2014)
pTH8491 		0.900 0.707
fgenesh1_pg.scaffold_194000034
M02480_2.00 		Physcomitrella patens
NNNGTACNNN
NNNGTACNNN		 PBM
Weirauch et al.(2014)
pTH8580 		0.898 0.720
estExt_fgenesh1_pg.C_1940033
M02479_2.00 		Physcomitrella patens
NNGTACGDH
DHCGTACNN		 PBM
Weirauch et al.(2014)
pTH8664 		0.897 0.787
SPL14
M02470_2.00 		Arabidopsis thaliana
NNNRTACNN
NNGTAYNNN		 PBM
Weirauch et al.(2014)
pTH8191 		0.895 0.707
SPL14
M07253_2.00 		Arabidopsis thaliana
NNNBGTACGGW
WCCGTACVNNN		 Dap-seq
OMalley et al.(2016)
SPL14_col_a 		0.895 0.707
SPL14
M11270_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPL14_01 		0.895 0.707
POPTR_0002s00440
M02477_2.00 		Populus trichocarpa
NGTACGG
CCGTACN		 PBM
Weirauch et al.(2014)
pTH9280 		0.892 0.680
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.886 0.680
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400059813 SBP 102 176

Links

Other SBP family TFs
Other Solanum tuberosum TFs

369 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ARB_04135 Arthroderma benhamiae ARB_04135 N
MCYG_05409 Arthroderma otae MCYG_05409 N
fgenesh1_pm.00735_#_84 Aspergillus carbonarius fgenesh1_pm.00735_#_84 N
ACLA_096080 Aspergillus clavatus CADACLAG00009312 N
CADAFLAG00006166 Aspergillus flavus CADAFLAG00006166 N
AFUA_6G04400 Aspergillus fumigatus CADAFUAG00000706 N
CADANGAG00011775 Aspergillus niger CADANGAG00011775 N
CADAORAG00010470 Aspergillus oryzae CADAORAG00010470 N
EURHEDRAFT_549252 Aspergillus ruber EURHEDRAFT_549252 N
PVAR5_0014 Byssochlamys spectabilis PVAR5_0014 N
CIMG_02684 Coccidioides immitis CIMG_02684 N
CPC735_036830 Coccidioides posadasii CPC735_036830 N
MCYG_05409 Microsporum canis MCYG_05409 N
MGYG_06463 Microsporum gypseum MGYG_06463 N
NFIA_050940 Neosartorya fischeri CADNFIAG00005325 N
Pc20g12070 Penicillium chrysogenum Pc20g12070 N
PDIP_17810 Penicillium digitatum PDIP_17810 N
PEX1_068950 Penicillium expansum PEX1_068950 N
PITC_021450 Penicillium italicum PITC_021450 N
PMAA_011930 Penicillium marneffei PMAA_011930 N
PCH_Pc20g12070 Penicillium rubens PCH_Pc20g12070 N
U727_00431261141 Penicillium solitum U727_00431261141 N
PMAA_011930 Talaromyces marneffei PMAA_011930 N
TSTA_005160 Talaromyces stipitatus TSTA_005160 N
TEQG_07461 Trichophyton equinum TEQG_07461 N
H101_04594 Trichophyton interdigitale H101_04594 N
H102_01813 Trichophyton rubrum H102_01813 N
H105_01827 Trichophyton soudanense H105_01827 N
TESG_03808 Trichophyton tonsurans TESG_03808 N
TRV_07172 Trichophyton verrucosum TRV_07172 N