30190.m011329 (Ricinus communis)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 30190.m011329 T323229_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.890 0.773
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.890 0.773
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.890 0.773
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
30190.m011329 SBP 57 131

Links

Other SBP family TFs
Other Ricinus communis TFs

163 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N 0.000
ACEP25962 Atta cephalotes ACEP25962 N 0.000
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N 0.000
ARID2 Bos taurus ENSBTAG00000011087 N 0.000
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I 0.000
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N 0.000
ARID2 Canis familiaris ENSCAFG00000009335 N 0.000
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N 0.000
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N 0.000
CLEC001081 Cimex lectularius CLEC001081 N 0.000
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N 0.000
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N 0.000
ARID2 Equus caballus ENSECAG00000019032 N 0.000
ARID2 Felis catus ENSFCAG00000012831 N 0.000
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N 0.000
HelroG195033 Helobdella robusta HelroG195033 N 0.000
ARID2 Homo sapiens ENSG00000189079 N 0.000
ISCW014107 Ixodes scapularis ISCW014107 N 0.000
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N 0.000
ARID2 Loxodonta africana ENSLAFG00000004415 N 0.000
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N 0.000
ARID2 Macaca mulatta ENSMMUG00000015962 N 0.000
ARID2 Microcebus murinus ENSMICG00000001487 N 0.000
ARID2 Monodelphis domestica ENSMODG00000018527 N 0.000
MDOA004973 Musca domestica MDOA004973 I 0.000
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N 0.000
ARID2 Myotis lucifugus ENSMLUG00000006908 N 0.000
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N 0.000
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N 0.000
ARID2 Oryctolagus cuniculus ENSOCUG00000013306 N 0.000
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.000
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N 0.000
PHUM060660 Pediculus humanus PHUM060660 N 0.000
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N 0.000
ARID2 Pteropus vampyrus ENSPVAG00000009834 N 0.000
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N 0.000
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N 0.000
PTSG_01032 Salpingoeca rosetta PTSG_01032 I 0.000
SINV17530 Solenopsis invicta SINV17530 N 0.000
ARID2 Sorex araneus ENSSARG00000007415 N 0.000
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N 0.000
Tal_R007164 Tyto alba Tal_R007164 N 0.000
ARID2 Vicugna pacos ENSVPAG00000004779 N 0.000
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N 0.000