CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.26527s0326
(
Boechera stricta
)
SBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03110 (SBP)
IPR004333
Bostr.26527s0326
T323390_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SPL7
M02476_2.00
Arabidopsis thaliana
DGTACKDNN
NNHMGTACH
PBM
Weirauch et al.(2014)
pTH7288
0.980
0.920
SPL7
M00888_2.00
Arabidopsis thaliana
GGRGDAAAGG
CCTTTHCYCC
PBM
Franco-Zorrilla et al.(2014)
SPL7
0.980
0.920
For this family, TFs with SR scores >
0.885
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.26527s0326.1.p
SBP
145
219
CQVPGCEVDISELKGYHRRHRVCLRCANASFVVLDGENKRYCQQCGKFHVLSDFDEGKRSCRRKLERHNNRRKRK
Links
Other
SBP
family TFs
Other
Boechera stricta
TFs
65 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy