Lus10006411.g (Linum usitatissimum)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 Lus10006411.g T323526_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPL10
M01084_2.00 		Arabidopsis thaliana
NNGTACGRHN
NDYCGTACNN		 PBM
Sullivan et al.(2014)
pTH9749 		0.945 0.853
SPL11
M02471_2.00 		Arabidopsis thaliana
NNNHGTACGGWN
NWCCGTACDNNN		 PBM
Weirauch et al.(2014)
pTH9392 		0.896 0.813
SPL11
M07254_2.00 		Arabidopsis thaliana
HTGTACTDDHH
DDHHAGTACAD		 Dap-seq
OMalley et al.(2016)
SPL11_col100_a 		0.896 0.813
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10006411 SBP 134 208

Links

Other SBP family TFs
Other Linum usitatissimum TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gene08188-v1.0-hybrid Fragaria vesca gene08188-v1.0-hybrid N
MDP0000171866 Malus domestica MDP0000171866 N
MDP0000176749 Malus domestica MDP0000176749 N
MDP0000183700 Malus domestica MDP0000183700 N
Pm020229 Prunus mume Pm020229 N
PRUPE_ppa009299mg Prunus persica PRUPE_ppa009299mg N