PK26639.1 (Cannabis sativa)
SBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03110 (SBP) IPR004333 PK26639.1 T323708_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK22320.1
M02483_2.00 		Cannabis sativa
NNGTACGGNN
NNCCGTACNN		 PBM
Weirauch et al.(2014)
pTH9723 		0.942 0.827
SPL3
M07255_2.00 		Arabidopsis thaliana
NGTACGGA
TCCGTACN		 Dap-seq
OMalley et al.(2016)
SPL3_col_a 		0.931 0.773
SPL3
M07256_2.00 		Arabidopsis thaliana
NDNTGTACGGAHN
NDTCCGTACANHN		 Dap-seq
OMalley et al.(2016)
SPL3_colamp_a 		0.931 0.773
SPL3
M02715_2.00 		Arabidopsis thaliana
DDDDDNGTACGKHHHH
DDDDMCGTACNHHHHH		 SELEX
Mathelier et al.(2014)
MA0577.1 		0.931 0.773
SPL4
M02472_2.00 		Arabidopsis thaliana
NRTACDDNN
NNHHGTAYN		 PBM
Weirauch et al.(2014)
pTH7408 		0.914 0.787
PK06791.1
M02482_2.00 		Cannabis sativa
NNGTACGRN
NYCGTACNN		 PBM
Weirauch et al.(2014)
pTH9583 		0.903 0.720
SPL12
M02475_2.00 		Arabidopsis thaliana
NGTACGDN
NHCGTACN		 PBM
Weirauch et al.(2014)
pTH7500 		0.901 0.720
For this family, TFs with SR scores > 0.885 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PK26639.1 SBP 59 133

Links

Other SBP family TFs
Other Cannabis sativa TFs

247 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CapteG101804 Capitella teleta CapteG101804 N
CapteG132489 Capitella teleta CapteG132489 N
ECANG7_00830 Echinococcus canadensis ECANG7_00830 N
EmuJ_000240200 Echinococcus multilocularis EmuJ_000240200 N
HelroG79060 Helobdella robusta HelroG79060 N
HmN_000166400 Hymenolepis microstoma HmN_000166400 N
SCUD_0000093801 Schistosoma curassoni SCUD_0000093801 N
A_03156 Schistosoma haematobium A_03156 N
Smp_034860 Schistosoma mansoni Smp_034860 N
SMU15028438 Schmidtea mediterranea SMU15028438 N