CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SMU15028438
(
Schmidtea mediterranea
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00105 (zf-C4)
IPR001628
SMU15028438
T307198_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMU15028438
Nuclear receptor
277
348
RKCDVCGDVSAGFHCSAFVCEACKKFFIRSSKGDSYTKYSCTKNNNCEIVKDTRTHCQYCRFQKCLHLGMTL
SMU15028438
Nuclear receptor
362
433
IPCRVCGAQSSGFHFGAITCEGCKGFFRRTINERENQKYTCRNGGNCVINLATRNNCKSCRYKKCLAMGMSK
Links
Other
Nuclear receptor
family TFs
Other
Schmidtea mediterranea
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ECANG7_00830
Echinococcus canadensis
ECANG7_00830
N
0.973
EmuJ_000240200
Echinococcus multilocularis
EmuJ_000240200
N
0.973
TASK_0000695601
Taenia asiatica
TASK_0000695601
N
0.973
Smp_034860
Schistosoma mansoni
Smp_034860
N
0.972
HmN_000166400
Hymenolepis microstoma
HmN_000166400
N
0.972
CapteG101804
Capitella teleta
CapteG101804
N
0.847
CapteG132489
Capitella teleta
CapteG132489
N
0.807
LotgiG77665
Lottia gigantea
LotgiG77665
N
0.789
SCUD_0000093801
Schistosoma curassoni
SCUD_0000093801
N
0.767
HelroG79060
Helobdella robusta
HelroG79060
N
0.766
CGI_10024692
Crassostrea gigas
CGI_10024692
N
0.751