CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CGI_10024692
(
Crassostrea gigas
)
Nuclear receptor
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00105 (zf-C4)
IPR001628
CGI_10024692
T301914_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EKC36526
Nuclear receptor
172
242
NPCQVCGDKAAGFYCGAFVCEACKKFFMRASRQQKVKYTCLKAKNCKITKESRVQCQYCRFQKCLSLSMSI
EKC36526
Nuclear receptor
259
330
IPCQVCNAPSSGFHFGALTCEGCKGFFRRIAKEKGNKQYRCSKSQNCEVTTGTRNLCRACRYQKCLDIGMSI
Links
Other
Nuclear receptor
family TFs
Other
Crassostrea gigas
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LotgiG77665
Lottia gigantea
LotgiG77665
N
0.909
CapteG132489
Capitella teleta
CapteG132489
N
0.783
HelroG79060
Helobdella robusta
HelroG79060
N
0.781
CapteG101804
Capitella teleta
CapteG101804
N
0.770
SMU15028438
Schmidtea mediterranea
SMU15028438
N
0.751