SIGF (Arabidopsis lyrata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 fgenesh2_kg.4__1742__AT2G36990.1 T323828_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.4__1742__AT2G36990.1 Sigma 70 310 380

Links

Other Sigma 70 family TFs
Other Arabidopsis lyrata TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000004562 Ailuropoda melanoleuca ENSAMEG00000004562 N
MBD4 Bos taurus ENSBTAG00000021645 N
MBD4 Callithrix jacchus ENSCJAG00000017293 N
MBD4 Canis familiaris ENSCAFG00000004867 N
ENSCPOG00000004970 Cavia porcellus ENSCPOG00000004970 N
ENSCSAG00000009037 Chlorocebus sabaeus ENSCSAG00000009037 N
MBD4 Dasypus novemcinctus ENSDNOG00000049619 N
MBD4 Equus caballus ENSECAG00000022106 N
MBD4 Erinaceus europaeus ENSEEUG00000011459 N
MBD4 Felis catus ENSFCAG00000000083 N
MBD4 Gorilla gorilla ENSGGOG00000010698 N
MBD4 Homo sapiens ENSG00000129071 N
MBD4 Loxodonta africana ENSLAFG00000010609 N
ENSP00000249910 Macaca fascicularis ENSP00000249910 N
MBD4 Macaca mulatta ENSMMUG00000012723 N
MBD4 Microcebus murinus ENSMICG00000008022 N
ENSMPUG00000017195 Mustela putorius furo ENSMPUG00000017195 N
Mbd4 Mus musculus ENSMUSG00000030322 N
Myotis_brandtii_MBD4_10028283 Myotis brandtii Myotis_brandtii_MBD4_10028283 N
MBD4 Myotis lucifugus ENSMLUG00000014766 N
ENSNLEG00000005337 Nomascus leucogenys ENSNLEG00000005337 N
MBD4 Ochotona princeps ENSOPRG00000000473 N
MBD4 Oryctolagus cuniculus ENSOCUG00000013006 N
MBD4 Otolemur garnettii ENSOGAG00000010236 N
ENSOARG00000014699 Ovis aries ENSOARG00000014699 N
MBD4 Pan troglodytes ENSPTRG00000015377 N
ENSPANG00000015047 Papio anubis ENSPANG00000015047 N
ENSPPYG00000013417 Pongo abelii ENSPPYG00000013417 N
MBD4 Procavia capensis ENSPCAG00000012915 N
MBD4 Pteropus vampyrus ENSPVAG00000005238 N
Mbd4 Rattus norvegicus ENSRNOG00000010919 N
ENSTSYG00000011147 Tarsius syrichta ENSTSYG00000011147 N
MBD4 Tupaia belangeri ENSTBEG00000003041 N
MBD4 Tursiops truncatus ENSTTRG00000011265 N
MBD4 Vicugna pacos ENSVPAG00000004040 N