GSMUA_Achr4G18530_001 (Musa acuminata)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 GSMUA_Achr4G18530_001 T323861_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr4P18530_001 Sigma 70 236 306

Links

Other Sigma 70 family TFs
Other Musa acuminata TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00248060 Amborella trichopoda AMTR_s00025p00248060 N 0.732
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.775
SIG4 Arabidopsis lyrata scaffold_601382.1 N 0.719
SIGD Arabidopsis thaliana AT5G13730 N 0.789
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.789
Bo9g166510 Brassica oleracea Bo9g166510 N 0.789
Bo2g011520 Brassica oleracea Bo2g011520 N 0.789
Bra008807 Brassica rapa Bra008807 N 0.789
Bra023430 Brassica rapa Bra023430 N 0.789
PK06863.1 Cannabis sativa PK06863.1 N 0.761
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.789
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.789
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.718
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.732
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.746
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.789
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.704
MTR_3g033420 Medicago truncatula MTR_3g033420 N 0.704
PDK_20s1385451g001 Phoenix dactylifera PDK_20s1385451g001 N 0.817
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.704
Pm016510 Prunus mume Pm016510 N 0.704
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.704
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.800