OMERI08G04040 (Oryza meridionalis)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04542 (Sigma70_r2) IPR007627 OMERI08G04040 T323909_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OMERI08G04040.1 Sigma 70 286 356
OMERI08G04040.2 Sigma 70 286 356
OMERI08G04040.3 Sigma 70 179 249
OMERI08G04040.4 Sigma 70 286 356

Links

Other Sigma 70 family TFs
Other Oryza meridionalis TFs

74 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_20966 Ancylostoma caninum ANCCAN_20966 I
ASIM_0001625501 Anisakis simplex ASIM_0001625501 N
ALUE_0001388001 Ascaris lumbricoides ALUE_0001388001 N
ALUE_0001936401 Ascaris lumbricoides ALUE_0001936401 N
ASU_12809 Ascaris suum ASU_12809 N
Bm6751 Brugia malayi Bm6751 N
BTMF_0000069401 Brugia timori BTMF_0000069401 N
BXY_1758300 Bursaphelenchus xylophilus BXY_1758300 N
CBG01045 Caenorhabditis briggsae CBG01045 I
CRE05176 Caenorhabditis remanei CRE05176 I
DICVIV_07866 Dictyocaulus viviparus DICVIV_07866 I
nDi.2.2.2.g08383 Dirofilaria immitis nDi.2.2.2.g08383 N
DME_0000089401 Dracunculus medinensis DME_0000089401 I
HPLM_0001799301 Haemonchus placei HPLM_0001799301 I
maker-nMf.1.1.scaf14853-snap-gene-0.4 Meloidogyne floridensis maker-nMf.1.1.scaf14853-snap-gene-0.4 N
MhA1_Contig131.frz3.gene12 Meloidogyne hapla MhA1_Contig131.frz3.gene12 N
Minc08811 Meloidogyne incognita Minc08811 N
WBGene00246765 Onchocerca volvulus WBGene00246765 N
L596_g3695 Steinernema carpocapsae L596_g3695 N
L889_g12838 Steinernema feltiae L889_g12838 N
L893_g18186 Steinernema glaseri L893_g18186 N
L898_g139 Steinernema monticolum L898_g139 N
L892_g4460 Steinernema scapterisci L892_g4460 N
SMUV_0000808801 Syphacia muris SMUV_0000808801 I
TELCIR_03315 Teladorsagia circumcincta TELCIR_03315 I
TCNE_0001371701 Toxocara canis TCNE_0001371701 N