CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TELCIR_03315
(
Teladorsagia circumcincta
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
TELCIR_03315
T170087_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mab-3
M00653_2.00
Caenorhabditis elegans
NWTGTTGCRN
NYGCAACAWN
PBM
Narasimhan et al.(2015)
pTH8998
0.856
0.677
mab-3
M07546_2.00
Caenorhabditis elegans
AATGTTGCSWWNT
ANWWSGCAACATT
EMSA
Mathelier et al.(2014)
MA0262.1
0.856
0.677
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TELCIR_03315
DM
28
73
KKYFCQRCLNHDLQFPRKGHKPVCKYASCTCSDCIMVEQRRQLNNM
TELCIR_03315
DM
93
142
RDPQCARCRQHGIRVPLRGHKRVLCQFANCKCEMAQCELVEDRRSLMAKQ
Links
Other
DM
family TFs
Other
Teladorsagia circumcincta
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DICVIV_07866
Dictyocaulus viviparus
DICVIV_07866
I
0.965
HPLM_0001799301
Haemonchus placei
HPLM_0001799301
I
0.965
ANCCAN_20966
Ancylostoma caninum
ANCCAN_20966
I
0.964
ACAC_0000218001
Angiostrongylus cantonensis
ACAC_0000218001
N
0.917
TELCIR_18692
Teladorsagia circumcincta
TELCIR_18692
N
0.913
ANCCEY_06946
Ancylostoma ceylanicum
ANCCEY_06946
N
0.885
BXY_1758300
Bursaphelenchus xylophilus
BXY_1758300
N
0.885
L893_g18186
Steinernema glaseri
L893_g18186
N
0.868
L898_g139
Steinernema monticolum
L898_g139
N
0.868
ALUE_0001936401
Ascaris lumbricoides
ALUE_0001936401
N
0.862
ASU_12809
Ascaris suum
ASU_12809
N
0.862
nDi.2.2.2.g08383
Dirofilaria immitis
nDi.2.2.2.g08383
N
0.862
CRE05176
Caenorhabditis remanei
CRE05176
I
0.860
WBGene00246765
Onchocerca volvulus
WBGene00246765
N
0.857
TCLT_0000932101
Thelazia callipaeda
TCLT_0000932101
N
0.857
Bm6751
Brugia malayi
Bm6751
N
0.856
mab-3
Caenorhabditis elegans
WBGene00003100
D
0.856
BTMF_0000069401
Brugia timori
BTMF_0000069401
N
0.856
DME_0000089401
Dracunculus medinensis
DME_0000089401
I
0.854
TCNE_0001371701
Toxocara canis
TCNE_0001371701
N
0.853
CJA05174
Caenorhabditis japonica
CJA05174
I
0.852
SMUV_0000808801
Syphacia muris
SMUV_0000808801
I
0.852
CBG01045
Caenorhabditis briggsae
CBG01045
I
0.849
L596_g3695
Steinernema carpocapsae
L596_g3695
N
0.847