Pm016510 (Prunus mume)
Sigma 70

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04542 (Sigma70_r2) IPR007627 Pm016510 T324061_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pm016510 Sigma 70 207 277

Links

Other Sigma 70 family TFs
Other Prunus mume TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00025p00248060 Amborella trichopoda AMTR_s00025p00248060 N 0.746
Aquca_014_00805 Aquilegia coerulea Aquca_014_00805 N 0.775
SIGD Arabidopsis thaliana AT5G13730 N 0.746
Bostr.2902s0107 Boechera stricta Bostr.2902s0107 N 0.746
Bo2g011520 Brassica oleracea Bo2g011520 N 0.761
Bo9g166510 Brassica oleracea Bo9g166510 N 0.761
Bra008807 Brassica rapa Bra008807 N 0.761
Bra023430 Brassica rapa Bra023430 N 0.761
PK06863.1 Cannabis sativa PK06863.1 N 0.761
Cagra.0596s0063 Capsella grandiflora Cagra.0596s0063 N 0.746
Carubv10001054m.g Capsella rubella Carubv10001054m.g N 0.746
evm.TU.supercontig_125.39 Carica papaya evm.TU.supercontig_125.39 N 0.803
Ciclev10033747m.g Citrus clementina Ciclev10033747m.g N 0.775
orange1.1g046578m.g Citrus sinensis orange1.1g046578m.g N 0.789
Thhalv10013654m.g Eutrema salsugineum Thhalv10013654m.g N 0.761
gene29494-v1.0-hybrid Fragaria vesca gene29494-v1.0-hybrid N 0.930
MDP0000266956 Malus domestica MDP0000266956 N 0.873
MDP0000235160 Malus domestica MDP0000235160 N 0.901
cassava43094.valid.m1 Manihot esculenta cassava43094.valid.m1 N 0.732
MTR_3g033420 Medicago truncatula MTR_3g033420 N 0.704
mgf003626m Mimulus guttatus mgf003626m N 0.761
GSMUA_Achr4G18530_001 Musa acuminata GSMUA_Achr4G18530_001 N 0.704
SIG4 Populus trichocarpa POPTR_0009s06210 N 0.746
PRUPE_ppa017025mg Prunus persica PRUPE_ppa017025mg N 0.986
Solyc01g087690.1 Solanum lycopersicum Solyc01g087690.1 N 0.761
PGSC0003DMG402006783 Solanum tuberosum PGSC0003DMG402006783 N 0.761
SIG4 Vitis vinifera VIT_13s0064g00190 N 0.789