smad4.2.L (Xenopus laevis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 XB-GENE-6256010 T325438_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.961 0.961
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.961 0.961
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.961 0.961
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.961 0.961
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.961 0.961
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.961 0.961
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.961 0.961
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.941 0.941
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.941 0.941
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI70463 SMAD 67 168

Links

Other SMAD family TFs
Other Xenopus laevis TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_05123 Beauveria bassiana BBA_05123 N 0.000
Bcin12g03220 Botrytis cinerea Bcin12g03220 N 0.000
G647_07147 Cladophialophora carrionii G647_07147 N 0.000
CFIO01_08188 Colletotrichum fioriniae CFIO01_08188 N 0.000
GLRG_05725 Colletotrichum graminicola GLRG_05725 N 0.000
CCM_04085 Cordyceps militaris CCM_04085 N 0.000
FFUJ_04779 Fusarium fujikuroi FFUJ_04779 N 0.000
FGRRES_09726_M Fusarium graminearum FGRRES_09726_M N 0.000
FOXG_08339 Fusarium oxysporum FOXG_08339 N 0.000
FPSE_06112 Fusarium pseudograminearum FPSE_06112 N 0.000
FVEG_06334 Fusarium verticillioides FVEG_06334 N 0.000
GGTG_02862 Gaeumannomyces graminis GGTG_02862 N 0.000
CMQ_4333 Grosmannia clavigera CMQ_4333 N 0.000
MGG_12349 Magnaporthe oryzae MGG_12349 N 0.000
MAPG_00964 Magnaporthe poae MAPG_00964 N 0.000
MBM_03326 Marssonina brunnea MBM_03326 N 0.000
MAC_00655 Metarhizium acridum MAC_00655 N 0.000
MANI_028372 Metarhizium anisopliae MANI_028372 N 0.000
MAJ_01787 Metarhizium majus MAJ_01787 N 0.000
X797_005257 Metarhizium robertsii X797_005257 N 0.000
NCU08307 Neurospora crassa NCU08307 N 0.000
estExt_Genewise1.C_31235 Neurospora discreta estExt_Genewise1.C_31235 N 0.000
NEUTE1DRAFT_145192 Neurospora tetrasperma NEUTE1DRAFT_145192 N 0.000
OIDMADRAFT_54905 Oidiodendron maius OIDMADRAFT_54905 N 0.000
F503_02958 Ophiostoma piceae uamh F503_02958 N 0.000
PFICI_04849 Pestalotiopsis fici PFICI_04849 N 0.000
V499_07180 Pseudogymnoascus pannorum V499_07180 N 0.000
SAPIO_CDS7214 Scedosporium apiospermum SAPIO_CDS7214 N 0.000
S40288_04025 Stachybotrys chartarum S40288_04025 N 0.000
S40285_00909 Stachybotrys chlorohalonata S40285_00909 N 0.000
VHEMI03590 Torrubiella hemipterigena VHEMI03590 N 0.000
TRIATDRAFT_34761 Trichoderma atroviride TRIATDRAFT_34761 N 0.000
TRIVIDRAFT_169905 Trichoderma virens TRIVIDRAFT_169905 N 0.000
VDBG_08285 Verticillium albo atrum VDBG_08285 N 0.000
VDBG_08285 Verticillium alfalfae VDBG_08285 N 0.000
VDAG_10262 Verticillium dahliae VDAG_10262 N 0.000