smad4.2.L (Xenopus laevis)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 XB-GENE-6256010 T325438_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.961 0.961
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.961 0.961
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.961 0.961
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.961 0.961
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.961 0.961
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.961 0.961
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.961 0.961
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.941 0.941
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.941 0.941
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI70463 SMAD 67 168

Links

Other SMAD family TFs
Other Xenopus laevis TFs

208 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
smad4.2.S Xenopus laevis XB-GENE-5995204 I 1.000
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.990
SMAD4 Homo sapiens ENSG00000141646 D 0.982
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.980
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.980
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.980
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.980
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.980
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.980
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.980
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.980
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I 0.971
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I 0.971
smad4a Danio rerio ENSDARG00000075226 I 0.971
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.971
smad4a Oryzias latipes ENSORLG00000005020 I 0.971
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I 0.971
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I 0.971
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.961
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.961
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.961
SMAD4 Bos taurus ENSBTAG00000006919 I 0.961
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.961
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.961
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.961
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.961
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.961
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.961
SMAD4 Equus caballus ENSECAG00000017857 I 0.961
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.961
SMAD4 Felis catus ENSFCAG00000005257 I 0.961
smad4a Gasterosteus aculeatus ENSGACG00000007495 I 0.961
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.961
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I 0.961
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.961
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.961
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.961
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.961
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.961
Smad4 Mus musculus ENSMUSG00000024515 D 0.961
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.961
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.961
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.961
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.961
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.961
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.961
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.961
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.961
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.961
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.961
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.961
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.961
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.961
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.961
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.961
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.961
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.961
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.961
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.961
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.961
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.961
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.961
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.961
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.961
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.961
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.961
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.961
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.961
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.961
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.961
AAH84196 Xenopus laevis AAH84196 I 0.961
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.961
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.961
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.960
AAEL013896 Aedes aegypti AAEL013896 I 0.951
AGAP002902 Anopheles gambiae AGAP002902 I 0.951
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.951
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.951
SMAD4 Danio rerio ENSDARG00000012649 I 0.951
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.951
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.951
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.951
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.951
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.951
HMEL002203 Heliconius melpomene HMEL002203 I 0.951
KGM_12572 Danaus plexippus KGM_12572 I 0.951
L798_13939 Zootermopsis nevadensis L798_13939 I 0.951
MCINX014520 Melitaea cinxia MCINX014520 I 0.951
PHUM002670 Pediculus humanus PHUM002670 I 0.951
SMAR013850 Strigamia maritima SMAR013850 I 0.951
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.951
AARA004719 Anopheles arabiensis AARA004719 I 0.951
AATE010695 Anopheles atroparvus AATE010695 I 0.951
ACHR000067 Anopheles christyi ACHR000067 I 0.951
ACOM037505 Anopheles coluzzii ACOM037505 I 0.951
ACUA025512 Anopheles culicifacies ACUA025512 I 0.951
ADIR002761 Anopheles dirus ADIR002761 I 0.951
AEPI002385 Anopheles epiroticus AEPI002385 I 0.951
AFAF011208 Anopheles farauti AFAF011208 I 0.951
AFUN009864 Anopheles funestus AFUN009864 I 0.951
AMAM019778 Anopheles maculatus AMAM019778 I 0.951
AMEM015931 Anopheles merus AMEM015931 I 0.951
AMIN000723 Anopheles minimus AMIN000723 I 0.951
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.951
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.951
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.941
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.941
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.941
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.941
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.941
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.941
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.941
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I 0.941
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I 0.941
Med Drosophila melanogaster FBgn0011655 D 0.941
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.941
GF22974 Drosophila ananassae FBgn0099968 I 0.941
GG11819 Drosophila erecta FBgn0104114 I 0.941
GH18642 Drosophila grimshawi FBgn0126109 I 0.941
GI23400 Drosophila mojavensis FBgn0146126 I 0.941
GL23637 Drosophila persimilis FBgn0161227 I 0.941
GM16436 Drosophila sechellia FBgn0171351 I 0.941
GJ23092 Drosophila virilis FBgn0210194 I 0.941
GK11724 Drosophila willistoni FBgn0213735 I 0.941
GE10952 Drosophila yakuba FBgn0228782 I 0.941
GB50071 Apis mellifera GB50071 I 0.941
ISCW018468 Ixodes scapularis ISCW018468 I 0.941
NV12984 Nasonia vitripennis NV12984 I 0.941
RPRC010188 Rhodnius prolixus RPRC010188 I 0.941
SINV15516 Solenopsis invicta SINV15516 I 0.941
TC010848 Tribolium castaneum TC010848 I 0.941
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.941
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.941
CLEC002594 Cimex lectularius CLEC002594 I 0.941
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.941
LCUP007928 Lucilia cuprina LCUP007928 I 0.941
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.941
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.941
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.941
MDOA012885 Musca domestica MDOA012885 I 0.941
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.941
ADAC007516 Anopheles darlingi ADAC007516 I 0.931
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.931
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.931
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.931
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.931
LotgiG131078 Lottia gigantea LotgiG131078 I 0.931
YQE_06624 Dendroctonus ponderosae YQE_06624 I 0.931
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.931
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.931
AALB009485 Anopheles albimanus AALB009485 I 0.931
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.922
CapteG179368 Capitella teleta CapteG179368 I 0.922
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.922
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.922
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.922
smad4 Ciona intestinalis ENSCING00000005559 I 0.912
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.912
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.902
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.892
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.873
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.863
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.863
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.863
SPU_017971 Strongylocentrotus purpuratus SPU_017971 I 0.855
HelroG88197 Helobdella robusta HelroG88197 I 0.853
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.843
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.843
ML02191a Mnemiopsis leidyi ML02191a I 0.843
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.843
Aan_R014474 Calypte anna Aan_R014474 I 0.828
ACEP19585 Atta cephalotes ACEP19585 I 0.824
T265_11013 Opisthorchis viverrini T265_11013 I 0.824
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.814
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.814
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I 0.814
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.814
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.814
CGI_10000594 Crassostrea gigas CGI_10000594 I 0.804
EFV62078 Trichinella spiralis EFV62078 I 0.804
HelroG76435 Helobdella robusta HelroG76435 I 0.804
D915_03789 Fasciola hepatica D915_03789 I 0.804
D917_09719 Trichinella nativa D917_09719 I 0.804
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.794
ENSLOCG00000012872 Lepisosteus oculatus ENSLOCG00000012872 I 0.784
NEMVEDRAFT_v1g18576 Nematostella vectensis NEMVEDRAFT_v1g18576 I 0.784
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.784
TRE_0001987301 Trichobilharzia regenti TRE_0001987301 I 0.784
Bm3575 Brugia malayi Bm3575 I 0.775
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.775
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.765
Sjc_0030450 Schistosoma japonicum Sjc_0030450 I 0.765
ASU_13433 Ascaris suum ASU_13433 I 0.765
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.765
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.765
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.765
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.765
tetur10g00380 Tetranychus urticae tetur10g00380 I 0.756
LOAG_08923 Loa loa LOAG_08923 I 0.755
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.755
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.755
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.755
Aqu1.229767 Amphimedon queenslandica Aqu1.229767 I 0.735
Smp_033950 Schistosoma mansoni Smp_033950 I 0.735
SMTD_0002197901 Schistosoma mattheei SMTD_0002197901 I 0.735
Sakowv30001112m.g Saccoglossus kowalevskii Sakowv30001112m.g I 0.731
SROB_0000384401 Schistosoma rodhaini SROB_0000384401 I 0.725
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.706