YQE_06624 (Dendroctonus ponderosae)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03165 (MH1) IPR003619 YQE_06624 T325242_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.971 0.971
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.971 0.971
Smad4
M05889_2.00 		Mus musculus
KCYAGACR
YGTCTRGM		 SMiLE-seq
Isakova et al.(2017)
Smad4 		0.951 0.951
SMAD4
M09377_2.00 		Homo sapiens
DRGTGNSAGACWN
NWGTCTSNCACYH		 Misc
Kulakovskiy et al.(2013)
SMAD4_HUMAN.H11MO.0.B 		0.951 0.951
Smad4
M09382_2.00 		Mus musculus
DGWGNBAGVCWN
NWGBCTVNCWCH		 Misc
Kulakovskiy et al.(2013)
SMAD4_MOUSE.H11MO.0.A 		0.951 0.951
SMAD4
M09634_2.00 		Homo sapiens
NNNYGTCTGS
SCAGACRNNN		 Misc
Heinz et al.(2010)
ESC-SMAD4_GSE29422 		0.951 0.951
SMAD4
M11275_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q4 		0.951 0.951
SMAD4
M11276_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6_01 		0.951 0.951
SMAD4
M11277_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SMAD4_Q6 		0.951 0.951
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENN76783 SMAD 35 136

Links

Other SMAD family TFs
Other Dendroctonus ponderosae TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TC010848 Tribolium castaneum TC010848 I 0.990
LDEC015949 Leptinotarsa decemlineata LDEC015949 I 0.990
AAEL013896 Aedes aegypti AAEL013896 I 0.980
L798_13939 Zootermopsis nevadensis L798_13939 I 0.980
PHUM002670 Pediculus humanus PHUM002670 I 0.980
SMAR013850 Strigamia maritima SMAR013850 I 0.980
CpipJ_CPIJ002563 Culex pipiens CpipJ_CPIJ002563 I 0.971
CPIJ002563 Culex quinquefasciatus CPIJ002563 I 0.971
Med Drosophila melanogaster FBgn0011655 D 0.971
GA14643 Drosophila pseudoobscura FBgn0074670 I 0.971
GF22974 Drosophila ananassae FBgn0099968 I 0.971
GG11819 Drosophila erecta FBgn0104114 I 0.971
GH18642 Drosophila grimshawi FBgn0126109 I 0.971
GI23400 Drosophila mojavensis FBgn0146126 I 0.971
GL23637 Drosophila persimilis FBgn0161227 I 0.971
GM16436 Drosophila sechellia FBgn0171351 I 0.971
GJ23092 Drosophila virilis FBgn0210194 I 0.971
GK11724 Drosophila willistoni FBgn0213735 I 0.971
GE10952 Drosophila yakuba FBgn0228782 I 0.971
GB50071 Apis mellifera GB50071 I 0.971
ISCW018468 Ixodes scapularis ISCW018468 I 0.971
NV12984 Nasonia vitripennis NV12984 I 0.971
SINV15516 Solenopsis invicta SINV15516 I 0.971
Cflo_07183--XP_392838.3_APIME Camponotus floridanus Cflo_07183--XP_392838.3_APIME I 0.971
Hsal_09633--XP_392838.3_APIME Harpegnathos saltator Hsal_09633--XP_392838.3_APIME I 0.971
LCUP007928 Lucilia cuprina LCUP007928 I 0.971
LLOJ008806 Lutzomyia longipalpis LLOJ008806 I 0.971
MDOA012885 Musca domestica MDOA012885 I 0.971
PPAI002168 Phlebotomus papatasi PPAI002168 I 0.971
SMAD4 Homo sapiens ENSG00000141646 D 0.964
AGAP002902 Anopheles gambiae AGAP002902 I 0.961
BGIBMGA010110 Bombyx mori BGIBMGA010110 I 0.961
DAPPUDRAFT_304115 Daphnia pulex DAPPUDRAFT_304115 I 0.961
ENSAMXG00000019219 Astyanax mexicanus ENSAMXG00000019219 I 0.961
smad4a Danio rerio ENSDARG00000075226 I 0.961
smad4a Oryzias latipes ENSORLG00000005020 I 0.961
ENSPFOG00000018987 Poecilia formosa ENSPFOG00000018987 I 0.961
ENSXMAG00000015245 Xiphophorus maculatus ENSXMAG00000015245 I 0.961
HMEL002203 Heliconius melpomene HMEL002203 I 0.961
KGM_12572 Danaus plexippus KGM_12572 I 0.961
MCINX014520 Melitaea cinxia MCINX014520 I 0.961
RPRC010188 Rhodnius prolixus RPRC010188 I 0.961
CLEC002594 Cimex lectularius CLEC002594 I 0.961
HHAL000394-PA Halyomorpha halys HHAL000394-PA I 0.961
AARA004719 Anopheles arabiensis AARA004719 I 0.961
AATE010695 Anopheles atroparvus AATE010695 I 0.961
ACHR000067 Anopheles christyi ACHR000067 I 0.961
ACOM037505 Anopheles coluzzii ACOM037505 I 0.961
ACUA025512 Anopheles culicifacies ACUA025512 I 0.961
ADIR002761 Anopheles dirus ADIR002761 I 0.961
AEPI002385 Anopheles epiroticus AEPI002385 I 0.961
AFAF011208 Anopheles farauti AFAF011208 I 0.961
AFUN009864 Anopheles funestus AFUN009864 I 0.961
AMAM019778 Anopheles maculatus AMAM019778 I 0.961
AMEM015931 Anopheles merus AMEM015931 I 0.961
AMIN000723 Anopheles minimus AMIN000723 I 0.961
AQUA009305 Anopheles quadriannulatus AQUA009305 I 0.961
ASTEI00079 Anopheles stephensi ASTEI00079 I 0.961
SMAD4 Microcebus murinus ENSMICG00000017525 I 0.958
SMAD4 Pteropus vampyrus ENSPVAG00000004261 I 0.958
ACYPI000365 Acyrthosiphon pisum ACYPI000365 I 0.951
ADAC007516 Anopheles darlingi ADAC007516 I 0.951
CapteG179368 Capitella teleta CapteG179368 I 0.951
SMAD4 Anolis carolinensis ENSACAG00000010186 I 0.951
ENSAMEG00000002899 Ailuropoda melanoleuca ENSAMEG00000002899 I 0.951
ENSAPLG00000003924 Anas platyrhynchos ENSAPLG00000003924 I 0.951
SMAD4 Bos taurus ENSBTAG00000006919 I 0.951
SMAD4 Canis familiaris ENSCAFG00000000164 I 0.951
SMAD4 Choloepus hoffmanni ENSCHOG00000000860 I 0.951
SMAD4 Callithrix jacchus ENSCJAG00000001910 I 0.951
SMAD4 Cavia porcellus ENSCPOG00000006470 I 0.951
ENSCSAG00000018094 Chlorocebus sabaeus ENSCSAG00000018094 I 0.951
SMAD4 Dasypus novemcinctus ENSDNOG00000005063 I 0.951
Smad4 Dipodomys ordii ENSDORG00000009089 I 0.951
SMAD4 Equus caballus ENSECAG00000017857 I 0.951
SMAD4 Echinops telfairi ENSETEG00000007750 I 0.951
SMAD4 Felis catus ENSFCAG00000005257 I 0.951
smad4a Gasterosteus aculeatus ENSGACG00000007495 I 0.951
SMAD4 Gorilla gorilla ENSGGOG00000013662 I 0.951
ENSGMOG00000005844 Gadus morhua ENSGMOG00000005844 I 0.951
SMAD4 Loxodonta africana ENSLAFG00000012595 I 0.951
SMAD4 Myotis lucifugus ENSMLUG00000013944 I 0.951
SMAD4 Macaca mulatta ENSMMUG00000018334 I 0.951
SMAD4 Monodelphis domestica ENSMODG00000010995 I 0.951
ENSMPUG00000008776 Mustela putorius furo ENSMPUG00000008776 I 0.951
Smad4 Mus musculus ENSMUSG00000024515 D 0.951
ENSNLEG00000011859 Nomascus leucogenys ENSNLEG00000011859 I 0.951
SMAD4 Ornithorhynchus anatinus ENSOANG00000008117 I 0.951
ENSOANG00000030959 Ornithorhynchus anatinus ENSOANG00000030959 I 0.951
ENSOARG00000004662 Ovis aries ENSOARG00000004662 I 0.951
SMAD4 Oryctolagus cuniculus ENSOCUG00000003929 I 0.951
SMAD4 Otolemur garnettii ENSOGAG00000012081 I 0.951
ENSONIG00000015035 Oreochromis niloticus ENSONIG00000015035 I 0.951
SMAD4 Ochotona princeps ENSOPRG00000013601 I 0.951
ENSPANG00000024703 Papio anubis ENSPANG00000024703 I 0.951
ENSPPYG00000009165 Pongo abelii ENSPPYG00000009165 I 0.951
ENSPSIG00000014614 Pelodiscus sinensis ENSPSIG00000014614 I 0.951
SMAD4 Pan troglodytes ENSPTRG00000010028 I 0.951
Smad4 Rattus norvegicus ENSRNOG00000051965 I 0.951
ENSSHAG00000010344 Sarcophilus harrisii ENSSHAG00000010344 I 0.951
SMAD4 Sus scrofa ENSSSCG00000004524 I 0.951
ENSSTOG00000028580 Ictidomys tridecemlineatus ENSSTOG00000028580 I 0.951
SMAD4 Tupaia belangeri ENSTBEG00000014105 I 0.951
ENSTSYG00000009792 Tarsius syrichta ENSTSYG00000009792 I 0.951
SMAD4 Vicugna pacos ENSVPAG00000006757 I 0.951
Afo_R008709 Aptenodytes forsteri Afo_R008709 I 0.951
Alligator_sinensis_CCG008910.1 Alligator sinensis Alligator_sinensis_CCG008910.1 I 0.951
Brh_R010414 Buceros rhinoceros Brh_R010414 I 0.951
Cmyd_10005540 Chelonia mydas Cmyd_10005540 I 0.951
ENSP00000341551-D1 Bos grunniens ENSP00000341551-D1 I 0.951
ENSP00000381452 Macaca fascicularis ENSP00000381452 I 0.951
Gfo_R011803 Geospiza fortis Gfo_R011803 I 0.951
Gfo_R016223 Geospiza fortis Gfo_R016223 I 0.951
Myotis_brandtii_Smad4_10005924 Myotis brandtii Myotis_brandtii_Smad4_10005924 I 0.951
Ogr14199 Ophisaurus gracilis Ogr14199 I 0.951
Pvit_01119 Pogona vitticeps Pvit_01119 I 0.951
e_gw.452.68.1 Branchiostoma floridae e_gw.452.68.1 I 0.951
AAH84196 Xenopus laevis AAH84196 I 0.951
HHAL000393-PA Halyomorpha halys HHAL000393-PA I 0.951
smad4.1 Xenopus tropicalis XB-GENE-485691 I 0.951
smad4.1.L Xenopus laevis XB-GENE-865543 I 0.951
AALB009485 Anopheles albimanus AALB009485 I 0.951
SMAD4 Danio rerio ENSDARG00000012649 I 0.941
SMAD4 Oryzias latipes ENSORLG00000007703 I 0.941
ENSPFOG00000019807 Poecilia formosa ENSPFOG00000019807 I 0.941
gb:cr929477 Tetraodon nigroviridis ENSTNIG00000003193 I 0.941
SMAD4 Tetraodon nigroviridis ENSTNIG00000009050 I 0.941
gb:cr929477 Takifugu rubripes ENSTRUG00000011769 I 0.941
SMAD4 Takifugu rubripes ENSTRUG00000014045 I 0.941
ENSXMAG00000005051 Xiphophorus maculatus ENSXMAG00000005051 I 0.941
SPU_004287 Strongylocentrotus purpuratus SPU_004287 I 0.941
Ogr06720 Ophisaurus gracilis Ogr06720 I 0.941
Ocbimv22032358m.g Octopus bimaculoides Ocbimv22032358m.g I 0.941
BGLB014287 Biomphalaria glabrata BGLB014287 I 0.941
ENSGACG00000016858 Gasterosteus aculeatus ENSGACG00000016858 I 0.931
ENSLACG00000007810 Latimeria chalumnae ENSLACG00000007810 I 0.931
ENSONIG00000014036 Oreochromis niloticus ENSONIG00000014036 I 0.931
ENSPMAG00000008404 Petromyzon marinus ENSPMAG00000008404 I 0.931
LotgiG131078 Lottia gigantea LotgiG131078 I 0.931
NEMVEDRAFT_v1g248037 Nematostella vectensis NEMVEDRAFT_v1g248037 I 0.931
smad4.2.S Xenopus laevis XB-GENE-5995204 I 0.931
smad4.2.L Xenopus laevis XB-GENE-6256010 I 0.931
smad4 Ciona intestinalis ENSCING00000005559 I 0.922
ENSCSAVG00000006480 Ciona savignyi ENSCSAVG00000006480 I 0.922
si:dkey-239n17.4 Danio rerio ENSDARG00000070428 I 0.922
ENSGMOG00000013964 Gadus morhua ENSGMOG00000013964 I 0.922
ENSMEUG00000001823 Macropus eugenii ENSMEUG00000001823 I 0.922
tetur10g00400 Tetranychus urticae tetur10g00400 I 0.922
ENSAMXG00000017275 Astyanax mexicanus ENSAMXG00000017275 I 0.912
ENSAMXG00000018339 Astyanax mexicanus ENSAMXG00000018339 I 0.912
si:dkey-222b8.1 Danio rerio ENSDARG00000045094 I 0.912
si:dkey-222b8.1 Gasterosteus aculeatus ENSGACG00000000538 I 0.912
ENSONIG00000001557 Oreochromis niloticus ENSONIG00000001557 I 0.912
ENSONIG00000010360 Oreochromis niloticus ENSONIG00000010360 I 0.912
ENSPMAG00000009414 Petromyzon marinus ENSPMAG00000009414 I 0.912
si:dkey-222b8.1 Takifugu rubripes ENSTRUG00000004163 I 0.912
HelroG88197 Helobdella robusta HelroG88197 I 0.912
CGI_10018464 Crassostrea gigas CGI_10018464 I 0.911
ACYPI003759 Acyrthosiphon pisum ACYPI003759 I 0.902
ENSGMOG00000000297 Gadus morhua ENSGMOG00000000297 I 0.902
YQE_08737 Dendroctonus ponderosae YQE_08737 I 0.902
fgenesh2_pg.scaffold_230000050 Branchiostoma floridae fgenesh2_pg.scaffold_230000050 I 0.902
ACYPI008450 Acyrthosiphon pisum ACYPI008450 I 0.892
ENSGACG00000003171 Gasterosteus aculeatus ENSGACG00000003171 I 0.892
ENSPFOG00000019867 Poecilia formosa ENSPFOG00000019867 I 0.882
ACYPI005550 Acyrthosiphon pisum ACYPI005550 I 0.873
si:dkey-222b8.1 Tetraodon nigroviridis ENSTNIG00000005007 I 0.873
ML02191a Mnemiopsis leidyi ML02191a I 0.873
SPU_017971 Strongylocentrotus purpuratus SPU_017971 I 0.873
Alligator_sinensis_CCG001823.1 Alligator sinensis Alligator_sinensis_CCG001823.1 I 0.873
XP_002161797.1 Hydra magnipapillata XP_002161797.1 I 0.873
Aqu1.215833 Amphimedon queenslandica Aqu1.215833 I 0.863
Aqu1.215834 Amphimedon queenslandica Aqu1.215834 I 0.863
ACEP19585 Atta cephalotes ACEP19585 I 0.853
TMUE_s0006012700 Trichuris muris TMUE_s0006012700 I 0.853
TTRE_0000855901 Trichuris trichiura TTRE_0000855901 I 0.853
EFV62078 Trichinella spiralis EFV62078 I 0.833
TriadG30731 Trichoplax adhaerens TriadG30731 I 0.833
D917_09719 Trichinella nativa D917_09719 I 0.833
SMU15015494 Schmidtea mediterranea SMU15015494 I 0.824
ASIM_0001604001 Anisakis simplex ASIM_0001604001 I 0.824
CGI_10000594 Crassostrea gigas CGI_10000594 I 0.821
ECPE_0001832001 Echinostoma caproni ECPE_0001832001 I 0.814
GPUH_0001329001 Gongylonema pulchrum GPUH_0001329001 I 0.814
T265_11013 Opisthorchis viverrini T265_11013 I 0.814
Aan_R014474 Calypte anna Aan_R014474 I 0.810
HelroG76435 Helobdella robusta HelroG76435 I 0.804
D915_03789 Fasciola hepatica D915_03789 I 0.804
D918_00298 Trichuris suis D918_00298 I 0.800
Bm3575 Brugia malayi Bm3575 I 0.794
ASU_13433 Ascaris suum ASU_13433 I 0.794
BTMF_0000404601 Brugia timori BTMF_0000404601 I 0.794
EEL_0000707501 Elaeophora elaphi EEL_0000707501 I 0.794
nAv.1.0.1.g00430 Acanthocheilonema viteae nAv.1.0.1.g00430 I 0.794
nDi.2.2.2.g01429 Dirofilaria immitis nDi.2.2.2.g01429 I 0.794
nLs.2.1.2.g01457 Litomosoides sigmodontis nLs.2.1.2.g01457 I 0.794
WUBG_02880 Wuchereria bancrofti WUBG_02880 I 0.784
WBGene00241622 Onchocerca volvulus WBGene00241622 I 0.784
nOo.2.0.1.g00181 Onchocerca ochengi nOo.2.0.1.g00181 I 0.784
TCLT_0000917301 Thelazia callipaeda TCLT_0000917301 I 0.784
TRE_0001987301 Trichobilharzia regenti TRE_0001987301 I 0.784
LOAG_08923 Loa loa LOAG_08923 I 0.775
tetur10g00380 Tetranychus urticae tetur10g00380 I 0.767
ENSLOCG00000012872 Lepisosteus oculatus ENSLOCG00000012872 I 0.765
Sjc_0030450 Schistosoma japonicum Sjc_0030450 I 0.765
Sakowv30001112m.g Saccoglossus kowalevskii Sakowv30001112m.g I 0.761
Aqu1.229767 Amphimedon queenslandica Aqu1.229767 I 0.755
NEMVEDRAFT_v1g18576 Nematostella vectensis NEMVEDRAFT_v1g18576 I 0.755
Smp_033950 Schistosoma mansoni Smp_033950 I 0.755
SMTD_0002197901 Schistosoma mattheei SMTD_0002197901 I 0.755
SROB_0000384401 Schistosoma rodhaini SROB_0000384401 I 0.745
EVEC_0000355201 Enterobius vermicularis EVEC_0000355201 I 0.717
Minc05381 Meloidogyne incognita Minc05381 I 0.716
Minc06628 Meloidogyne incognita Minc06628 I 0.716
ANCCAN_20978 Ancylostoma caninum ANCCAN_20978 I 0.716
L596_g15 Steinernema carpocapsae L596_g15 I 0.716
L889_g28104 Steinernema feltiae L889_g28104 I 0.716
L893_g15056 Steinernema glaseri L893_g15056 I 0.716
L893_g344 Steinernema glaseri L893_g344 I 0.716
L898_g17086 Steinernema monticolum L898_g17086 I 0.716
maker-nMf.1.1.scaf02670-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf02670-augustus-gene-0.3 I 0.716
OESDEN_03018 Oesophagostomum dentatum OESDEN_03018 I 0.716
SVUK_0000938201 Strongylus vulgaris SVUK_0000938201 I 0.716
TELCIR_19676 Teladorsagia circumcincta TELCIR_19676 I 0.716
HPBE_0001599301 Heligmosomoides bakeri HPBE_0001599301 I 0.714
L889_g22387 Steinernema feltiae L889_g22387 I 0.713
L892_g27454 Steinernema scapterisci L892_g27454 I 0.711
SMU15001649 Schmidtea mediterranea SMU15001649 N 0.706
GPLIN_000772200 Globodera pallida GPLIN_000772200 I 0.706
HCOI00676200 Haemonchus contortus HCOI00676200 I 0.706
CBN31444 Caenorhabditis brenneri CBN31444 I 0.703