L893_g344 (Steinernema glaseri)
SMAD

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03165 (MH1) IPR003619 L893_g344 T325777_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Med
M06447_2.00 		Drosophila melanogaster
KCGBCDKKSHVT
ABDSMMHGVCGM		 B1H
Zhu et al.(2011)
Med_FlyReg_FBgn0011655 		0.716 0.716
Med
M09693_2.00 		Drosophila melanogaster
YYBYVYCTGYY
RRCAGRBRVRR		 Misc
Kulakovskiy et al.(2009)
Med 		0.716 0.716
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L893_g344.t1 SMAD 49 150

Links

Other SMAD family TFs
Other Steinernema glaseri TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
VNI1 Arabidopsis lyrata fgenesh2_kg.6__879__AT5G09330.2 N 0.000
NAC082 Arabidopsis thaliana AT5G09330 N 0.000
Bostr.13129s0062 Boechera stricta Bostr.13129s0062 N 0.000
Bo2g009300 Brassica oleracea Bo2g009300 I 0.000
Bo3g005150 Brassica oleracea Bo3g005150 N 0.000
Bra006019 Brassica rapa Bra006019 N 0.000
Bra009379 Brassica rapa Bra009379 N 0.000
Bra028640 Brassica rapa Bra028640 I 0.000
Cagra.1365s0106 Capsella grandiflora Cagra.1365s0106 N 0.000
Carubv10001139m.g Capsella rubella Carubv10001139m.g N 0.000
Thhalv10013785m.g Eutrema salsugineum Thhalv10013785m.g N 0.000
cassava2513.valid.m1 Manihot esculenta cassava2513.valid.m1 I 0.000
cassava2514.valid.m1 Manihot esculenta cassava2514.valid.m1 I 0.000
cassava2515.valid.m1 Manihot esculenta cassava2515.valid.m1 I 0.000