CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SVE_0858500
(
Strongyloides venezuelensis
)
SMAD
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03165 (MH1)
IPR003619
SVE_0858500
T325932_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
sma-4
M02484_2.00
Caenorhabditis elegans
NNCCAGACANN
NNTGTCTGGNN
PBM
Weirauch et al.(2014)
pTH8996
0.772
0.772
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SVE_0858500.1
SMAD
199
299
VKKAIESLVKKLKDKRTELDALITAVTSAGKTPSVCVTIPRSLDGRLQVAGKKGVPHVVYAQIWRWPNVNKSELQKLPICEVSNDNQEVICINPYHYERIV
Links
Other
SMAD
family TFs
Other
Strongyloides venezuelensis
TFs
44 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AAEL011359
Aedes aegypti
AAEL011359
N
0.000
AALB003318
Anopheles albimanus
AALB003318
N
0.000
AARA010518
Anopheles arabiensis
AARA010518
N
0.000
AATE012701
Anopheles atroparvus
AATE012701
N
0.000
ACOM037786
Anopheles coluzzii
ACOM037786
N
0.000
ACUA009064
Anopheles culicifacies
ACUA009064
N
0.000
ADAC003441
Anopheles darlingi
ADAC003441
N
0.000
ADIR001048
Anopheles dirus
ADIR001048
N
0.000
AEPI002999
Anopheles epiroticus
AEPI002999
N
0.000
AFAF003258
Anopheles farauti
AFAF003258
N
0.000
AFUN002858
Anopheles funestus
AFUN002858
N
0.000
AGAP013287
Anopheles gambiae
AGAP013287
N
0.000
AMAM002295
Anopheles maculatus
AMAM002295
N
0.000
AMEC007532
Anopheles melas
AMEC007532
N
0.000
AMEM000708
Anopheles merus
AMEM000708
N
0.000
AMIN005282
Anopheles minimus
AMIN005282
N
0.000
AQUA008196
Anopheles quadriannulatus
AQUA008196
N
0.000
ASIS002506
Anopheles sinensis
ASIS002506
N
0.000
ASTEI10578
Anopheles stephensi
ASTEI10578
N
0.000
GB45138
Apis mellifera
GB45138
N
0.000
CpipJ_CPIJ019088
Culex pipiens
CpipJ_CPIJ019088
N
0.000
CPIJ019088
Culex quinquefasciatus
CPIJ019088
N
0.000
GF21808
Drosophila ananassae
FBgn0098808
N
0.000
GG17798
Drosophila erecta
FBgn0110020
N
0.000
GH12805
Drosophila grimshawi
FBgn0120284
N
0.000
NFAT
Drosophila melanogaster
FBgn0030505
N
0.000
GI15077
Drosophila mojavensis
FBgn0137827
N
0.000
GL22604
Drosophila persimilis
FBgn0160195
N
0.000
GA10815
Drosophila pseudoobscura
FBgn0070871
N
0.000
GM17623
Drosophila sechellia
FBgn0172531
N
0.000
GJ18884
Drosophila virilis
FBgn0206030
N
0.000
GK24938
Drosophila willistoni
FBgn0226897
N
0.000
GE17094
Drosophila yakuba
FBgn0234577
N
0.000
HHAL007230-PA
Halyomorpha halys
HHAL007230-PA
N
0.000
LDEC006285
Leptinotarsa decemlineata
LDEC006285
N
0.000
NV18092
Nasonia vitripennis
NV18092
N
0.000
PHUM363570
Pediculus humanus
PHUM363570
N
0.000
TC014708
Tribolium castaneum
TC014708
N
0.000
L798_07911
Zootermopsis nevadensis
L798_07911
N
0.000