aug1.99_g20191 (Bigelowiella natans)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00505 (HMG_box) IPR000910 aug1.99_g20191 T326501_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
JGI_V11_145483 Sox 77 145

Links

Other Sox family TFs
Other Bigelowiella natans TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G09550 Brachypodium distachyon BRADI1G09550 N 0.000
PK04189.1 Cannabis sativa PK04189.1 N 0.000
evm.TU.supercontig_20.16 Carica papaya evm.TU.supercontig_20.16 N 0.000
Ca_05292 Cicer arietinum Ca_05292 N 0.000
GLYMA07G30140 Glycine max GLYMA07G30140 N 0.000
GLYMA08G07170 Glycine max GLYMA08G07170 N 0.000
chr4.CM0100.130.nc Lotus japonicus chr4.CM0100.130.nc N 0.000
GSMUA_Achr6G04510_001 Musa acuminata GSMUA_Achr6G04510_001 N 0.000
GSMUA_Achr7G01650_001 Musa acuminata GSMUA_Achr7G01650_001 N 0.000
OBART03G33220 Oryza barthii OBART03G33220 N 0.000
OB03G40300 Oryza brachyantha OB03G40300 N 0.000
ORGLA03G0301600 Oryza glaberrima ORGLA03G0301600 N 0.000
OGLUM03G32890 Oryza glumaepatula OGLUM03G32890 N 0.000
GATA19 Oryza indica BGIOSGA009856 N 0.000
OLONG_026796 Oryza longistaminata OLONG_026796 N 0.000
OMERI03G29830 Oryza meridionalis OMERI03G29830 N 0.000
ONIVA03G34920 Oryza nivara ONIVA03G34920 N 0.000
OPUNC03G30420 Oryza punctata OPUNC03G30420 N 0.000
ORUFI03G34610 Oryza rufipogon ORUFI03G34610 N 0.000
GATA19 Oryza sativa OS03G0734900 N 0.000
Pavir.Ia00665 Panicum virgatum Pavir.Ia00665 N 0.000
Pavir.J00664 Panicum virgatum Pavir.J00664 N 0.000
Pm022161 Prunus mume Pm022161 N 0.000
PRUPE_ppa023830mg Prunus persica PRUPE_ppa023830mg N 0.000
Si036747m.g Setaria italica Si036747m.g N 0.000
Sb01g008950 Sorghum bicolor Sb01g008950 N 0.000
GRMZM2G065896 Zea mays GRMZM2G065896 N 0.000