CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CC1G_10870
(
Coprinopsis cinerea
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
CC1G_10870
T326944_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mat1-Mc
M11340_2.00
Schizosaccharomyces pombe
NRMNNAACAAAGAVRYMW
AKRYBTCTTTGTTNNKYN
Transfac
Matys et al.(2006)
F$MAT1MC_01
0.489
0.449
mat1-Mc
M11341_2.00
Schizosaccharomyces pombe
YYHATTGTYD
HRACAATDRR
Transfac
Matys et al.(2006)
F$MAT1MC_02
0.489
0.449
fmf-1
M02491_2.00
Neurospora crassa
TCTTTGTY
RACAAAGA
PBM
Weirauch et al.(2014)
pTH8941
0.433
0.391
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAU87276
Sox
41
118
IPRPSNAFMIYRRERQQRFEQEALEMQGDGSDPKSTFGHVSRCAGAAWRNESEEVRSLYFAKAEQEKKEHKKLYPDYK
Links
Other
Sox
family TFs
Other
Coprinopsis cinerea
TFs
190 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMAG_06979
Allomyces macrogynus
AMAG_06979
I
0.441
AB07429.1
Alternaria brassicicola
AB07429.1
I
0.426
AOL_s00076g682
Arthrobotrys oligospora
AOL_s00076g682
I
0.420
ARB_03691
Arthroderma benhamiae
ARB_03691
I
0.434
MCYG_01459
Arthroderma otae
MCYG_01459
I
0.434
AGOS_AAR026W
Ashbya gossypii
AGOS_AAR026W
I
0.432
fgenesh1_pg.00676_#_1
Aspergillus carbonarius
fgenesh1_pg.00676_#_1
I
0.437
ACLA_051410
Aspergillus clavatus
CADACLAG00004834
I
0.430
AFUA_4G12410
Aspergillus fumigatus
CADAFUAG00008054
I
0.430
ANIA_03667
Aspergillus nidulans
CADANIAG00005066
I
0.438
CADANGAG00000780
Aspergillus niger
CADANGAG00000780
I
0.437
EURHEDRAFT_505813
Aspergillus ruber
EURHEDRAFT_505813
I
0.435
M437DRAFT_14409
Aureobasidium melanogenum
M437DRAFT_14409
I
0.435
BATDEDRAFT_7482
Batrachochytrium dendrobatidis
BATDEDRAFT_7482
I
0.427
BATDEDRAFT_7668
Batrachochytrium dendrobatidis
BATDEDRAFT_7668
I
0.440
BAUCODRAFT_126300
Baudoinia compniacensis
BAUCODRAFT_126300
N
0.425
BAUCODRAFT_67524
Baudoinia compniacensis
BAUCODRAFT_67524
I
0.421
COCC4DRAFT_128466
Bipolaris maydis
COCC4DRAFT_128466
I
0.426
COCMIDRAFT_89918
Bipolaris oryzae
COCMIDRAFT_89918
I
0.426
COCSADRAFT_234458
Bipolaris sorokiniana
COCSADRAFT_234458
I
0.426
COCVIDRAFT_36811
Bipolaris victoriae
COCVIDRAFT_36811
I
0.426
COCCADRAFT_94527
Bipolaris zeicola
COCCADRAFT_94527
I
0.426
BDDG_02210
Blastomyces dermatitidis
BDDG_02210
I
0.428
BOTBODRAFT_114819
Botryobasidium botryosum
BOTBODRAFT_114819
I
0.425
PVAR5_4317
Byssochlamys spectabilis
PVAR5_4317
I
0.428
A1O1_06327
Capronia coronata
A1O1_06327
I
0.420
A1O3_09986
Capronia epimyces
A1O3_09986
I
0.426
CHGG_02745
Chaetomium globosum
CHGG_02745
I
0.440
CTHT_0010110
Chaetomium thermophilum
CTHT_0010110
I
0.422
Z519_03613
Cladophialophora bantiana
Z519_03613
I
0.426
G647_06434
Cladophialophora carrionii
G647_06434
I
0.426
A1O5_05497
Cladophialophora psammophila
A1O5_05497
I
0.426
A1O5_13042
Cladophialophora psammophila
A1O5_13042
I
0.451
A1O7_06104
Cladophialophora yegresii
A1O7_06104
I
0.426
CIMG_07042
Coccidioides immitis
CIMG_07042
I
0.434
CPC735_033930
Coccidioides posadasii
CPC735_033930
I
0.434
estExt_fgenesh1_pg.C_60282
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_60282
I
0.426
CFIO01_08136
Colletotrichum fioriniae
CFIO01_08136
I
0.426
CGGC5_15243
Colletotrichum gloeosporioides
CGGC5_15243
I
0.434
GLRG_03847
Colletotrichum graminicola
GLRG_03847
I
0.434
GLRG_04643
Colletotrichum graminicola
GLRG_04643
I
0.423
CH063_07887
Colletotrichum higginsianum
CH063_07887
I
0.434
Cob_07979
Colletotrichum orbiculare
Cob_07979
I
0.434
CSUB01_02050
Colletotrichum sublineola
CSUB01_02050
I
0.423
CSUB01_06308
Colletotrichum sublineola
CSUB01_06308
I
0.434
W97_06647
Coniosporium apollinis
W97_06647
I
0.420
CC1G_00255
Coprinopsis cinerea
CC1G_00255
I
0.470
estExt_fgenesh1_pg.C_40373
Cryphonectria parasitica
estExt_fgenesh1_pg.C_40373
I
0.428
HMPREF1541_00526
Cyphellophora europaea
HMPREF1541_00526
I
0.420
H072_3206
Dactylellina haptotyla
H072_3206
I
0.420
DICSQDRAFT_32143
Dichomitus squalens
DICSQDRAFT_32143
I
0.456
DOTSEDRAFT_49782
Dothistroma septosporum
DOTSEDRAFT_49782
I
0.427
DRE_01366
Drechslerella stenobrocha
DRE_01366
I
0.420
EPUS_08057
Endocarpon pusillum
EPUS_08057
I
0.443
Ecym_1257
Eremothecium cymbalariae
Ecym_1257
I
0.440
A1O9_08028
Exophiala aquamarina
A1O9_08028
I
0.420
HMPREF1120_03762
Exophiala dermatitidis
HMPREF1120_03762
I
0.420
PV11_06959
Exophiala sideris
PV11_06959
I
0.426
PV08_03042
Exophiala spinifera
PV08_03042
I
0.426
PV05_08438
Exophiala xenobiotica
PV05_08438
I
0.420
FIBRA_02642
Fibroporia radiculosa
FIBRA_02642
I
0.425
FOMPIDRAFT_1121239
Fomitopsis pinicola
FOMPIDRAFT_1121239
N
0.431
Z517_01278
Fonsecaea pedrosoi
Z517_01278
I
0.426
FFUJ_05685
Fusarium fujikuroi
FFUJ_05685
I
0.435
FGRRES_08893
Fusarium graminearum
FGRRES_08893
I
0.437
NechaG74402
Fusarium solani
NechaG74402
I
0.426
GLOTRDRAFT_127199
Gloeophyllum trabeum
GLOTRDRAFT_127199
N
0.448
GLOTRDRAFT_28355
Gloeophyllum trabeum
GLOTRDRAFT_28355
I
0.419
CMQ_6002
Grosmannia clavigera
CMQ_6002
I
0.420
GYMLUDRAFT_48274
Gymnopus luxurians
GYMLUDRAFT_48274
I
0.423
gw1.1.1214.1
Heterobasidion annosum
gw1.1.1214.1
I
0.452
HETIRDRAFT_244598
Heterobasidion irregulare
HETIRDRAFT_244598
I
0.452
HCBG_03487
Histoplasma capsulatum
HCBG_03487
I
0.428
HCBG_03538
Histoplasma capsulatum
HCBG_03538
I
0.428
JAAARDRAFT_93880
Jaapia argillacea
JAAARDRAFT_93880
I
0.434
KAFR_0G02830
Kazachstania africana
KAFR_0G02830
I
0.463
K443DRAFT_1017
Laccaria amethystina
K443DRAFT_1017
N
0.455
LACBIDRAFT_386478
Laccaria bicolor
LACBIDRAFT_386478
N
0.455
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
0.439
LEMA_P053570.1
Leptosphaeria maculans
LEMA_P053570.1
I
0.426
MELLADRAFT_94219
Melampsora laricipopulina
MELLADRAFT_94219
N
0.422
MCYG_01459
Microsporum canis
MCYG_01459
I
0.434
MGYG_04614
Microsporum gypseum
MGYG_04614
I
0.434
E5Q_05542
Mixia osmundae
E5Q_05542
I
0.437
fgenesh1_pg.scaffold_35000054
Monosiga brevicollis
fgenesh1_pg.scaffold_35000054
I
0.415
fgeneshMC_pg.3_#_1116
Mucor circinelloides
fgeneshMC_pg.3_#_1116
I
0.431
fgeneshMC_pg.3_#_188
Mucor circinelloides
fgeneshMC_pg.3_#_188
I
0.431
MYCTH_2115094
Myceliophthora thermophila
MYCTH_2115094
I
0.440
gw1.1.1805.1
Mycosphaerella graminicola
gw1.1.1805.1
I
0.420
gw1.2.1019.1
Mycosphaerella graminicola
gw1.2.1019.1
I
0.426
fgenesh1_pg.sca_1_chr1_3_0000013
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0000013
I
0.426
UCRNP2_4825
Neofusicoccum parvum
UCRNP2_4825
I
0.420
UCRNP2_5172
Neofusicoccum parvum
UCRNP2_5172
I
0.435
NFIA_031140
Neosartorya fischeri
CADNFIAG00002745
I
0.430
NFIA_103860
Neosartorya fischeri
CADNFIAG00010220
I
0.430
fmf-1
Neurospora crassa
NCU09387
D
0.433
aug-scaffold_2.g772
Neurospora discreta
aug-scaffold_2.g772
I
0.433
NEUTE1DRAFT_126312
Neurospora tetrasperma
NEUTE1DRAFT_126312
I
0.433
F503_06238
Ophiostoma piceae uamh
F503_06238
I
0.428
PABG_00540
Paracoccidioides brasiliensis
PABG_00540
I
0.428
PAAG_03088
Paracoccidioides sp lutzii
PAAG_03088
I
0.428
PAXINDRAFT_17515
Paxillus involutus
PAXINDRAFT_17515
I
0.422
PAXRUDRAFT_47613
Paxillus rubicundulus
PAXRUDRAFT_47613
I
0.429
Pc22g05580
Penicillium chrysogenum
Pc22g05580
I
0.420
PDIP_85740
Penicillium digitatum
PDIP_85740
I
0.420
PEX1_050910
Penicillium expansum
PEX1_050910
I
0.420
PITC_067750
Penicillium italicum
PITC_067750
I
0.420
PMAA_043500
Penicillium marneffei
PMAA_043500
I
0.428
PDE_08506
Penicillium oxalicum
PDE_08506
I
0.427
PCH_Pc22g05580
Penicillium rubens
PCH_Pc22g05580
I
0.420
U727_00431750231
Penicillium solitum
U727_00431750231
I
0.420
PFICI_01201
Pestalotiopsis fici
PFICI_01201
I
0.433
SNOG_06805
Phaeosphaeria nodorum
SNOG_06805
I
0.426
fgenesh1_pg.C_scaffold_14000043
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_14000043
I
0.419
gwh2.14.289.1
Phanerochaete chrysosporium
gwh2.14.289.1
I
0.425
PLEOSDRAFT_1104604
Pleurotus ostreatus
PLEOSDRAFT_1104604
I
0.446
PODANS_1_13940
Podospora anserina
PODANS_1_13940
I
0.440
GMDG_00488
Pseudogymnoascus destructans
GMDG_00488
I
0.420
V499_02697
Pseudogymnoascus pannorum
V499_02697
I
0.420
PTT_17171
Pyrenophora teres
PTT_17171
I
0.426
PTRG_00506
Pyrenophora triticirepentis
PTRG_00506
I
0.426
Z518_05535
Rhinocladiella mackenziei
Z518_05535
I
0.426
V565_010180
Rhizoctonia solani
V565_010180
I
0.452
GLOINDRAFT_204670
Rhizophagus irregularis
GLOINDRAFT_204670
I
0.459
GLOINDRAFT_336169
Rhizophagus irregularis
GLOINDRAFT_336169
N
0.455
GLOINDRAFT_342443
Rhizophagus irregularis
GLOINDRAFT_342443
N
0.424
GLOINDRAFT_44046
Rhizophagus irregularis
GLOINDRAFT_44046
I
0.430
GLOINDRAFT_44333
Rhizophagus irregularis
GLOINDRAFT_44333
I
0.433
GLOINDRAFT_49297
Rhizophagus irregularis
GLOINDRAFT_49297
I
0.434
GLOINDRAFT_50485
Rhizophagus irregularis
GLOINDRAFT_50485
I
0.479
GLOINDRAFT_55507
Rhizophagus irregularis
GLOINDRAFT_55507
N
0.418
GLOINDRAFT_60750
Rhizophagus irregularis
GLOINDRAFT_60750
I
0.472
GLOINDRAFT_61497
Rhizophagus irregularis
GLOINDRAFT_61497
I
0.423
GLOINDRAFT_75094
Rhizophagus irregularis
GLOINDRAFT_75094
I
0.428
GLOINDRAFT_81724
Rhizophagus irregularis
GLOINDRAFT_81724
I
0.472
RO3G_10448
Rhizopus oryzae
RO3G_10448
I
0.431
RO3G_12867
Rhizopus oryzae
RO3G_12867
I
0.484
RHTO_08065
Rhodosporidium toruloides
RHTO_08065
N
0.421
RTG_02343
Rhodotorula glutinis
RTG_02343
N
0.428
AACERI_AaceriAAR026W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAAR026W
I
0.440
SAPIO_CDS6811
Scedosporium apiospermum
SAPIO_CDS6811
I
0.434
SCHCODRAFT_114988
Schizophyllum commune
SCHCODRAFT_114988
I
0.450
SJAG_05153
Schizosaccharomyces japonicus
SJAG_05153
I
0.419
SOCG_02523
Schizosaccharomyces octosporus
SOCG_02523
I
0.512
mat3-Mc
Schizosaccharomyces pombe
SPBC1711.02
I
0.489
mat1-Mc
Schizosaccharomyces pombe
SPBC23G7.09
D
0.489
mat3-Mc
Schizosaccharomyces pombe
SPMTR.04
I
0.489
SCLCIDRAFT_6962
Scleroderma citrinum
SCLCIDRAFT_6962
I
0.435
SERLA73DRAFT_18439
Serpula lacrymans
SERLA73DRAFT_18439
I
0.439
SETTUDRAFT_141783
Setosphaeria turcica
SETTUDRAFT_141783
I
0.426
SMAC_04250
Sordaria macrospora
SMAC_04250
I
0.433
SMAC_07212
Sordaria macrospora
SMAC_07212
I
0.434
M422DRAFT_111122
Sphaerobolus stellatus
M422DRAFT_111122
I
0.463
M422DRAFT_111323
Sphaerobolus stellatus
M422DRAFT_111323
I
0.422
M422DRAFT_114792
Sphaerobolus stellatus
M422DRAFT_114792
N
0.493
M422DRAFT_115248
Sphaerobolus stellatus
M422DRAFT_115248
I
0.422
M422DRAFT_146751
Sphaerobolus stellatus
M422DRAFT_146751
N
0.492
M422DRAFT_89155
Sphaerobolus stellatus
M422DRAFT_89155
I
0.418
M422DRAFT_89750
Sphaerobolus stellatus
M422DRAFT_89750
I
0.419
M422DRAFT_91926
Sphaerobolus stellatus
M422DRAFT_91926
I
0.462
SEPMUDRAFT_160654
Sphaerulina musiva
SEPMUDRAFT_160654
I
0.427
SPPG_01987
Spizellomyces punctatus
SPPG_01987
I
0.451
SPPG_05561
Spizellomyces punctatus
SPPG_05561
I
0.475
SPBR_00669
Sporothrix brasiliensis
SPBR_00669
I
0.421
HMPREF1624_06196
Sporothrix schenckii
HMPREF1624_06196
I
0.421
S40288_04059
Stachybotrys chartarum
S40288_04059
I
0.429
S40285_08558
Stachybotrys chlorohalonata
S40285_08558
I
0.429
SNOG_06805
Stagonospora nodorum
SNOG_06805
I
0.426
CY34DRAFT_797588
Suillus luteus
CY34DRAFT_797588
I
0.427
PMAA_043500
Talaromyces marneffei
PMAA_043500
I
0.428
TBLA_0J01680
Tetrapisispora blattae
TBLA_0J01680
I
0.421
THITE_2111506
Thielavia terrestris
THITE_2111506
N
0.433
THITE_2154193
Thielavia terrestris
THITE_2154193
I
0.440
TDEL_0H02760
Torulaspora delbrueckii
TDEL_0H02760
I
0.479
BN946_scf184829.g29
Trametes cinnabarina
BN946_scf184829.g29
I
0.466
BN946_scf184994.g56
Trametes cinnabarina
BN946_scf184994.g56
I
0.450
H101_05516
Trichophyton interdigitale
H101_05516
I
0.434
H102_00913
Trichophyton rubrum
H102_00913
I
0.434
H105_00920
Trichophyton soudanense
H105_00920
I
0.434
TESG_07204
Trichophyton tonsurans
TESG_07204
I
0.434
TRV_02614
Trichophyton verrucosum
TRV_02614
I
0.434
GSTUM_00000587001
Tuber melanosporum
GSTUM_00000587001
I
0.420
UREG_05828
Uncinocarpus reesii
UREG_05828
I
0.434
Kpol_401p4
Vanderwaltozyma polyspora
Kpol_401p4
I
0.428
PV09_02982
Verruconis gallopava
PV09_02982
I
0.420
VDBG_05105
Verticillium albo atrum
VDBG_05105
I
0.433
VDBG_05105
Verticillium alfalfae
VDBG_05105
I
0.433
VDAG_08843
Verticillium dahliae
VDAG_08843
I
0.433
Mycgr3G19556
Zymoseptoria tritici
Mycgr3G19556
I
0.420
Mycgr3G19569
Zymoseptoria tritici
Mycgr3G19569
I
0.426