CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMG20B
(
Myotis lucifugus
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00505 (HMG_box)
IPR000910
ENSMLUG00000022392
T328383_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Hmg20b
M02487_2.00
Mus musculus
NNATTATWHWN
NWDWATAATNN
PBM
Weirauch et al.(2014)
pTH8555
0.714
0.942
For this family, TFs with SR scores >
0.415
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000022148
Sox
70
138
PKAPVTGYVRFLNERREQIRTRHPDLPFPEITKMLGAEWSKLQPTEKQRYLDEAEREKQQYIKELRAYQ
Links
Other
Sox
family TFs
Other
Myotis lucifugus
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACRE_065800
Acremonium chrysogenum
ACRE_065800
N
0.000
BBA_02662
Beauveria bassiana
BBA_02662
I
0.000
Bcin15g02520
Botrytis cinerea
Bcin15g02520
N
0.000
A1O1_05413
Capronia coronata
A1O1_05413
N
0.000
A1O3_09265
Capronia epimyces
A1O3_09265
N
0.000
W97_01247
Coniosporium apollinis
W97_01247
N
0.000
NechaG89899
Fusarium solani
NechaG89899
N
0.000
MAC_07154
Metarhizium acridum
MAC_07154
N
0.000
X797_005779
Metarhizium robertsii
X797_005779
N
0.000
NCU09804
Neurospora crassa
NCU09804
N
0.000
VHEMI08921
Torrubiella hemipterigena
VHEMI08921
N
0.000
VDBG_04863
Verticillium albo atrum
VDBG_04863
N
0.000
VDBG_04863
Verticillium alfalfae
VDBG_04863
N
0.000