CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04863
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04863
T358002_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04863T0
Zinc cluster
30
72
LSCYPCRTRKLKCDRSHPCSNCVKREGEDVSTCSYATPSARKK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_04863
Verticillium alfalfae
VDBG_04863
N
0.683
NCU09804
Neurospora crassa
NCU09804
N
0.612
ACRE_065800
Acremonium chrysogenum
ACRE_065800
N
0.606
MAC_07154
Metarhizium acridum
MAC_07154
N
0.606
X797_005779
Metarhizium robertsii
X797_005779
N
0.606
VHEMI08921
Torrubiella hemipterigena
VHEMI08921
N
0.589
UCREL1_367
Eutypa lata
UCREL1_367
I
0.546
NechaG89899
Fusarium solani
NechaG89899
N
0.541
fgenesh1_pm.sca_1_chr1_3_0000032
Nectria haematococca
fgenesh1_pm.sca_1_chr1_3_0000032
N
0.541